|
| Status |
Public on Sep 05, 2023 |
| Title |
L1 |
| Sample type |
SRA |
| |
|
| Source name |
murine liver tissue
|
| Organism |
Mus musculus |
| Characteristics |
tissue: murine liver tissue
genotype: P40-/- IL2RA-/-
treatment: CAR-T infusion
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted utilizing RNA iso Plus (TaKaRa, 9109) from liver tissues
RNA libraries were prepared for sequencing using standard Illumina protocols
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Data processing |
STAR-2.5.2b software was used to map reads to the reference genome.
Assembly: mm10
Supplementary files format and content: tab-delimited text files include RPKM values for bulk RNA-seq Samples
|
| |
|
| Submission date |
Aug 16, 2023 |
| Last update date |
Sep 05, 2023 |
| Contact name |
Hao-Xian ZHU |
| E-mail(s) |
zhuhx97@gmail.com
|
| Organization name |
Guangdong Provincial People’s Hospital
|
| Street address |
No. 106, Zhongshan 2nd Road
|
| City |
guangzhou |
| State/province |
Guangdong |
| ZIP/Postal code |
510000 |
| Country |
China |
| |
|
| Platform ID |
GPL24247 |
| Series (1) |
| GSE241014 |
Targeting pathogenic CD8+ tissue-resident T cells with chimeric antigen receptor therapy in murine autoimmune cholangitis |
|
| Relations |
| BioSample |
SAMN37008724 |
| SRA |
SRX21384388 |
