|
| Status |
Public on Aug 03, 2011 |
| Title |
Susie_vs_PPY9 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
Tissue sampled after natural death
|
| Organism |
Pongo abelii |
| Characteristics |
sample type: Susie reference sample
|
| Growth protocol |
Tissue were maintained in -20C freezer before DNA extraction
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA extracted by standard phenol chloroform extraction protocol
|
| Label |
Cy5
|
| Label protocol |
Performed by NimbleGen according to manufacturer's direction
|
| |
|
| Channel 2 |
| Source name |
Tissue sampled after natural death
|
| Organism |
Pongo abelii |
| Characteristics |
sample type: PPY9 test sample
|
| Growth protocol |
Tissue were maintained in -20C freezer before DNA extraction
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA extracted by standard phenol chloroform extraction protocol
|
| Label |
Cy3
|
| Label protocol |
Performed by NimbleGen according to manufacturer's direction
|
| |
|
| |
| Hybridization protocol |
Performed by NimbleGen according to manufacturer's direction
|
| Scan protocol |
Performed by NimbleGen according to manufacturer's direction
|
| Data processing |
Normalization was performed using NimbleScan 2.4.
|
| |
|
| Submission date |
Jul 11, 2011 |
| Last update date |
Aug 03, 2011 |
| Contact name |
Arcadi Navarro |
| E-mail(s) |
arcadi.navarro@upf.edu
|
| Phone |
(+34)933160844
|
| Organization name |
University Pompeu Fabra
|
| Street address |
Plaça Charles Darwin, 1
|
| City |
Barcelona |
| ZIP/Postal code |
08003 |
| Country |
Spain |
| |
|
| Platform ID |
GPL7749 |
| Series (1) |
| GSE30559 |
Great Ape Copy Number Variation |
|
