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Sample GSM639883 Query DataSets for GSM639883
Status Public on Dec 15, 2010
Title Basal epidermal cells, Sample 2
Sample type RNA
Source name Human epidermis from brest reduction
Organism Homo sapiens
Characteristics cell type: Basal epidermal cells
donor: 2
Extracted molecule total RNA
Extraction protocol Standard Affymetrix protocol
Label Biotin
Label protocol Standard Affymetrix protocol
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Data processing MAS 5.0
Submission date Dec 14, 2010
Last update date Dec 15, 2010
Contact name Miroslav Blumenberg
Phone 212 263-5924
Organization name NYU School of Medicine
Department Dermatology
Lab Blumenberg
Street address 455 First Ave #874
City New York
State/province NY
ZIP/Postal code 10016
Country USA
Platform ID GPL571
Series (1)
GSE26059 Epidermal differentiation: basal vs. suprabasal keratinocytes

Data table header descriptions
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)

Data table
AFFX-BioB-5_at 252.836 P 0.000509415
AFFX-BioB-M_at 398.626 P 5.16732e-05
AFFX-BioB-3_at 225.085 P 0.000126798
AFFX-BioC-5_at 609.861 P 6.02111e-05
AFFX-BioC-3_at 541.807 P 4.42873e-05
AFFX-BioDn-5_at 695.594 P 4.42873e-05
AFFX-BioDn-3_at 3854.63 P 7.00668e-05
AFFX-CreX-5_at 7872.1 P 5.16732e-05
AFFX-CreX-3_at 7850.84 P 4.42873e-05
AFFX-DapX-5_at 19.4067 P 0.0309764
AFFX-DapX-M_at 12.5299 A 0.239063
AFFX-DapX-3_at 2.37717 A 0.876428
AFFX-LysX-5_at 1.83374 A 0.368438
AFFX-LysX-M_at 16.9525 A 0.470241
AFFX-LysX-3_at 1.71965 A 0.645547
AFFX-PheX-5_at 4.20272 A 0.60308
AFFX-PheX-M_at 1.59455 A 0.794268
AFFX-PheX-3_at 5.50049 A 0.724854
AFFX-ThrX-5_at 12.1113 A 0.645547
AFFX-ThrX-M_at 9.22325 A 0.485109

Total number of rows: 22277

Table truncated, full table size 666 Kbytes.

Supplementary file Size Download File type/resource
GSM639883_Alix_B4+_3_U133A2.0.CEL.gz 2.0 Mb (ftp)(http) CEL
GSM639883_Alix_B4+_3_U133A2.0.CHP.gz 442.7 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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