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Sample GSM6171593 Query DataSets for GSM6171593
Status Public on May 22, 2022
Title Aosa07leg
Sample type SRA
 
Source name leg muscle
Organism Anolis osa
Characteristics tissue: leg muscle
Sex: male
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from whole muscle using Trizol extractions
Libraries were constructed using BGI
 
Library strategy RNA-Seq
Library source transcriptomic
Library selection cDNA
Instrument model BGISEQ-500
 
Data processing Adaptors trimmed, low quality ends removed and pair ends overlapped with HTStream
Sequences mapped to Anolis carolinensis using STAR
genes counted using STAR
Assembly: Anolis carolinensis genome
Supplementary files format and content: tab deliminated .txt file with raw read counts per loci
 
Submission date May 19, 2022
Last update date May 22, 2022
Contact name Andrea Lyn Liebl
E-mail(s) andrea.liebl@usd.edu
Phone 6056586711
Organization name University of South Dakota
Department Biology
Street address 414 E Clark Street
City Vermillion
State/province SD
ZIP/Postal code 57069
Country USA
 
Platform ID GPL32274
Series (1)
GSE203413 Gene expression and muscle contractile physiology in anoles
Relations
BioSample SAMN28555507
SRA SRX15388095

Supplementary data files not provided
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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