|
Status |
Public on Nov 08, 2008 |
Title |
Ag-D-CEN.PK-1N-D-g162-c1-DNA |
Sample type |
genomic |
|
|
Channel 1 |
Source name |
9500 MATalpha (Strain Name : CEN.PK haploid)
|
Organism |
Saccharomyces cerevisiae |
Characteristics |
Strain Name : CEN.PK haploid
|
Biomaterial provider |
Cheryl Christianson, Dunham Lab, Princeton University
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Extracted molecule : Genomic DNA Extraction method : Hoffman-Winston prep http://genomics.princeton.edu/dunham/MDyeastDNAprep.pdf
|
Label |
Cy3
|
Label protocol |
reference URL : http://genomics.princeton.edu/dunham/MDAgilentDNA.pdf
|
|
|
Channel 2 |
Source name |
F14 5/20/06 c1 (Strain Name : G6 c1)
|
Organism |
Saccharomyces cerevisiae |
Characteristics |
Strain Name : G6 c1
|
Biomaterial provider |
Cheryl Christianson, Dunham Lab, Princeton University
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Extracted molecule : Genomic DNA Extraction method : Hoffman-Winston prep http://genomics.princeton.edu/dunham/MDyeastDNAprep.pdf
|
Label |
Cy5
|
Label protocol |
reference URL : http://genomics.princeton.edu/dunham/MDAgilentDNA.pdf
|
|
|
|
Hybridization protocol |
reference URL : http://genomics.princeton.edu/dunham/MDAgilentDNA.pdf
|
Scan protocol |
Pixel Size : 10 Scan Date : 2006-08-04 Scan Time : 10:40:02 Scanner Make : Agilent Technologies Scanner Scanner Model : G2505B Scanning software : ChipScan Scanning software version : A.6.3.1
|
Description |
Experiment design: DNA from each evolved clone or population is hybridized vs DNA from the matched ancestor strain Complete protocols also available as supplementary files on the Series record
|
Data processing |
Extraction Software : Agilent Feature Extractor Extraction Software Version : A.7.5.1 Datafile type : Agilent result file
|
|
|
Submission date |
Nov 03, 2008 |
Last update date |
Nov 07, 2008 |
Contact name |
Maitreya J. Dunham |
E-mail(s) |
maitreya@uw.edu
|
Phone |
206-543-2338
|
Organization name |
University of Washington
|
Department |
Genome Sciences
|
Lab |
Dunham Lab
|
Street address |
Foege Building, S403B, Box 355065
|
City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98195-5065 |
Country |
USA |
|
|
Platform ID |
GPL2883 |
Series (1) |
GSE13435 |
The Repertoire and Dynamics of Evolutionary Adaptations to Controlled Nutrient-Limited Environments in Yeast |
|