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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T04_NC_01
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.702368
165
166.245
69
69.7684
1120
1151.68
33
32.4081
2
0
79
79.3833
71
71.3506
81.5
82.1667
33
33.0295
3
-0.195398
574
584.677
71
70.8659
1723
1747.76
32
32.1739
4
-0.182619
669
661.984
70
69.9014
1933
1957.27
31
31.493
5
-0.433589
353
335.4
67
66.3579
1594.5
1592.53
30
30.5404
6
0.23502
596
593.267
66
65.8857
711
724.883
31
31.3571
7
-0.20541
494
511.344
65
66.3857
1533
1555.23
33
32.7393
8
0.153474
242
248.774
70
70.066
372
371.906
33
33.1944
9
-0.0879895
99
102
71
71.5417
144
149.784
33
33.3646
10
0.11707
300
311.655
73
73.5087
488
493.964
33
33.654
11
-0.0434862
142
145.891
70
70.7204
264
267.418
32
31.8387
12
-0.212517
109
108.586
66
66.3249
210.5
222.431
32
31.5993
13
-0.169103
162
164.085
64
63.965
409
418.39
31
30.6783
14
-0.371747
172
173.59
59
58.8796
672
687.869
27.5
27.7555
15
0.135571
289
279.397
60
60.6762
440
443.048
29
28.7295
16
0.148055
159
159.321
61
61.5414
236
238.604
31
31.4793
17
0.0376557
137
133.585
64
64.3071
225
221.566
33
32.5
18
0.415641
490.5
496.362
63
63.4778
431
448.655
34
34.1706
19
-0.0126095
247
265.264
72
71.6964
521
536.283
35
35.0964
20
-0.282021
105
105.519
72
72.2263
203.5
207.889
35
35.3467
Total number of rows: 21446 Table truncated, full table size 1302 Kbytes .Supplementary data files not provided