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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C57_T40_NC_01
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.468937
400
400.914
71
71.3055
1573
1588.17
31
31.0036
2
0
90
90.2241
71
70.7306
74
75.4828
30
30.1181
3
-0.177397
551
550.018
70
70.2572
1216.5
1211.86
30
30.3804
4
-0.11552
1185
1175.96
70
70.226
2334
2327.77
30
30.5445
5
-0.294269
433.5
439.804
69
69.8287
1213.5
1222.55
31
31.2133
6
0.191848
289
290.203
69
68.476
321
317.729
33
32.7491
7
-0.364584
575
565.236
69
69.0407
1857
1873.55
32
32.1259
8
0.109083
605
611.217
69
69.0143
718.5
751.367
30
30.7143
9
0.145981
164
173.291
69
69.4334
179
188.4
30
30.5939
10
0.0130033
290.5
305.224
68
68.2327
453
459.672
31
30.9673
11
0.107195
296
310.86
68
68.5491
376
393.175
30
30.0291
12
0.110425
136.5
137.84
68
68.4626
148.5
150.64
31
30.7082
13
-0.0194614
320
325.208
69
69.0353
515
520.264
31
30.7102
14
-0.363633
597.5
610.15
70
69.8821
2021
2027.25
30
30.6393
15
0.0333234
340
355.783
70
70.2318
510.5
514.717
30
30.5606
16
0.127266
358.5
358.926
70.5
69.8963
437
437.63
31
30.9333
17
0.120533
289.5
297.125
70
69.4613
362.5
367.107
32
32.1444
18
0.385235
721
735.947
70
69.3405
514
524.404
32
32.6093
19
-0.0769513
214
224.793
70
71.1685
373.5
378.345
34
34.2939
20
0.0915022
225
232.17
71
71.227
282
292.717
35
34.9574
Total number of rows: 21446 Table truncated, full table size 1313 Kbytes .Supplementary data files not provided