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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C57_T04_NC_01
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.866925
177
183.754
77
76.7881
1652
1704.47
42
42.1264
2
0
84
84.6842
76
76.6131
89
89.4912
43
43.4124
3
-0.240819
446.5
448.018
76
75.9495
1341
1342.86
43
43.4801
4
-0.231701
586
592.632
75
75.3554
1736
1759.49
42
42.5087
5
-0.5122
261
265.053
74
74.2191
1346
1337.26
41
41.6431
6
0.299339
317
319.177
74
73.6884
355.5
355.968
42
42.4638
7
-0.985061
151.5
150.121
74
73.9146
1581.5
1633.12
40
40.5836
8
0.0591715
115
115.831
72
73.1237
159
159.525
39
39.5936
9
-0.0814784
85
85.5273
73
72.8936
102
101.745
39
38.8191
10
-0.0710555
211.5
214.793
73
73.885
445.5
450.138
38
38.3519
11
0.0175018
114.5
115.759
74
73.8434
161.5
165.397
39
38.7402
12
0.0241937
99
100.443
73
73.5345
125
127.951
38
38.4436
13
-0.0926129
209
211.241
73
73.6619
470.5
460.224
39
38.8648
14
-0.958425
159
158.559
74
74.4693
1675
1680.58
41
41.1191
15
0.113509
173
171.618
73
73.9582
257
252.236
39
38.4181
16
0.0992018
98.5
99.6333
72
72.6947
118
119.383
38
38.4667
17
-0.0526992
91
91.3966
72
72.2359
114.5
117.069
39
38.4613
18
0.539519
772
785.279
73
72.6993
485
490.016
38
38.6189
19
-0.0686206
215.5
221.286
73
73.9756
464.5
463.946
38
38.7178
20
0.0298643
114
114.895
74
73.0717
159
161.895
38
38.0609
Total number of rows: 21446 Table truncated, full table size 1301 Kbytes .Supplementary data files not provided