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Sample GSM26780 Query DataSets for GSM26780
Status Public on Aug 01, 2004
Title mouse aorta cross strain comparison, C57_T40_HF_01
Sample type RNA
 
Channel 1
Source name mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name mouse embryonic day 17.5 total RNA
Organism Mus musculus
Extracted molecule total RNA
 
 
Description C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice
T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on.
HF denotes high-fat diet, whereas NC is normal chow diet
Keywords = mouse aorta
Keywords = cross strain comparison
 
Submission date Jul 13, 2004
Last update date May 27, 2005
Contact name Raymond Tabibiazar
E-mail(s) rtabibiazar@cvmed.stanford.edu
Phone 650-723-8222 ext 14604
Organization name Stanford
Street address
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platform ID GPL891
Series (1)
GSE1560 Aortas of mice on high fat diet

Data table header descriptions
ID_REF
VALUE logRatio of value
CH1_Median CH1 (F635) median fluorescence
CH1_MEAN CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median CH2 (F532) median fluorescence intensity
CH2_MEAN CH2 (F532) mean fluorescence intensity
CH2_BKD_Median CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN CH2 (F532) background mean fluorescence intensity

Data table
ID_REF VALUE CH1_Median CH1_MEAN CH1BKD_Median CH1BKD_Mean CH2_Median CH2_MEAN CH2_BKD_Median CH2_BKD_MEAN
1 -0.33147 305 305.085 75 75.4345 1260 1253.92 36 36.367
2 0.379692 167 167.017 75.5 76.5146 194.5 197.707 36 36.1861
3 0.0777462 1735.5 1718.67 77 76.8036 3414.5 3372.72 37 36.4643
4 -0.115 696 689.867 75 75.354 1893 1902.1 36 35.6825
5 -0.169594 486 504.327 75 75.6796 1515 1535.56 35 34.8556
6 0.285925 327.5 326.7 75 75.2369 432.5 435.8 34 34.0976
7 -0.57654 182.5 181.929 74 73.925 1074.5 1081.91 34.5 34.6107
8 -0.0475134 188 188.75 73 73.9723 431.5 429.942 34 34.2457
9 0.0739966 147 147.839 73 73.8799 249.5 255.145 34 34.2367
10 0.0340983 273 275.678 73 73.6452 573 573.712 35 34.5663
11 -0.0285767 160 159.468 74 74.3273 329.5 331.677 35 34.6079
12 0.0323001 119 118.233 74 74.3945 187.5 188.483 35 34.8374
13 -0.0878677 269 266.107 75 74.7909 681 685.036 35 34.9408
14 -0.563124 191 191.448 76 75.6099 1096 1118.02 34 34.5887
15 0.0420449 211 213.161 75 74.986 426 426.536 35 35.1684
16 0.0375862 153 155 75 75.419 286.5 285.241 35 35.2218
17 0.0756957 216 216.841 75 75.0075 421 411.413 35 35.4851
18 0.480239 808 809.236 78 77.6966 665 665.873 36 36.1655
19 -0.0681964 185 186.228 77 77.7698 425 428.14 36 36.241
20 -0.0232033 141 140.328 75 75.1773 269.5 267.776 35 34.7624

Total number of rows: 21446

Table truncated, full table size 1307 Kbytes.




Supplementary data files not provided

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