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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T40_HF_02
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.757054
127.5
127.625
74
74.4461
953.5
949.696
36
35.5465
2
0
84.5
84.5172
74
74
75.5
76.4138
35
34.5719
3
-0.204525
236
240.373
72
72.6596
827
828.847
34
34.7908
4
-0.153236
317
314.2
73
72.5986
1023
1005.05
35
34.8889
5
-0.410173
166
163.123
73
72.9582
761
748.351
34
34.6655
6
0.314722
278
284.544
72.5
72.4681
359
373.228
34
34.3936
7
-0.676183
137
140.95
72
73.1558
988
1000.43
35
35.3188
8
0.273021
131.5
132.85
71
71.1503
166.5
162.483
34
34.5594
9
0.121692
90
88.375
72
71.8821
91
91.2857
35
35.5071
10
-0.0429611
195
198.857
72
72.0857
489
485.746
35
35.0429
11
0.155187
156
158.115
73
73.7208
244
245.492
35
35.2049
12
0.0593686
112.5
112.982
73
73.3786
163
163.196
36
35.8571
13
-0.0480224
227
233.065
74
74.8014
594.5
585.984
36
35.8404
14
-0.808515
121
122.746
75
74.9247
957
957.814
36
36.2939
15
-0.0689605
111
112
75
75.325
187
186.328
35
35.5214
16
0.406639
110
109.051
77
76.8676
97
97.3051
35
35.3603
17
0.212449
99
99.2321
77
77.0037
94.5
96.1964
35
34.8358
18
0.545513
384
394.544
77
77.0645
335
333.825
35
35.319
19
-0.171756
177
175.738
77
77.362
500
504.574
35
34.9785
20
0.0931088
104.5
105.839
77
76.928
122.5
125.179
35
34.7879
Total number of rows: 21446 Table truncated, full table size 1297 Kbytes .Supplementary data files not provided