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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T08_NC_02
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-1.07688
123.5
124.85
84
85.0791
1371.5
1397.85
45
45.0504
2
0.0748345
104
104.153
84
84.3536
166
167.661
47
47.308
3
-0.161647
222
225.93
84
84.1728
733
735.912
46
46.2096
4
-0.171516
242
242.19
84
84.2143
808
807.017
44
44.4607
5
-0.479963
143
143.984
83
83.7455
677
670.918
45
44.4727
6
0.342914
179
180.729
84
84.1915
276
274.661
45
44.9929
7
-1.05592
127.5
128.774
84
83.9784
1490
1502.79
47
47.6583
8
0.181109
115
116.63
84
84.3622
196
196.259
50.5
51.0236
9
0.126272
103.5
103.414
85
84.8044
159
158.81
46
46.1587
10
-0.0436853
141
142.4
85
84.6632
331
331.255
46
45.8472
11
0.00493184
118
119.82
84
83.9053
233.5
233.78
44
44.2947
12
0.00850806
126
125.831
84
84.3832
247
252.864
44
44.3613
13
-0.0296503
167.5
167.433
87
87.5833
412.5
408.383
53
53.0521
14
-1.08692
141.5
142.293
85.5
85.8069
1928
1969.4
52
53.0966
15
-0.168738
102
104.86
84
84.029
200
199.579
44
44.2572
16
0.11937
104
104.649
82
82.4322
168
168.86
45
44.7802
17
0.172745
103
104.033
82
81.4875
164
164.574
44
44.3665
18
0.570863
236
241.778
81
81.2652
274
272.508
44
44.3154
19
-0.161558
131
134.614
82
82.0396
366
364.561
44
44.5036
20
0.0982164
106
107.386
82
82.6344
177
179.386
45
45
Total number of rows: 21446 Table truncated, full table size 1297 Kbytes .Supplementary data files not provided