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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T04_NC_02
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.459397
256
258.4
82
82.8707
1258
1249.4
60
61.4932
2
-0.103711
104
102.783
82
82.0607
199
202.467
57
58.7821
3
-0.268712
513
509.545
80
80.6447
1863
1856.58
55
55.3553
4
-0.214865
527.5
524.093
82
81.8333
1683
1707.31
55
54.7721
5
-0.545378
300
294.246
79
80.3903
1730
1747.54
55
55.6468
6
0.263423
357.5
363.774
82
81.4141
518
513.161
56
56.6953
7
-0.47952
212
215.81
81
80.5439
1042.5
1044.55
53
53.5965
8
0.0499073
190.5
193.419
78
78.5238
359
387.871
48
48.63
9
-0.0682411
104.5
105.81
79
79.0714
206
208.207
49
50.0071
10
0.079387
402
400.745
78
78.1722
742
741.691
47
46.7546
11
-0.0642002
154
156.237
77
77.3659
354
352.068
44
44.7464
12
-0.00656589
136
140.517
78
78.2464
288.5
290.328
49
48.7391
13
-0.117751
181.5
187.19
78
78.6964
470.5
475.207
49
48.7214
14
-0.653966
196
195.963
79
79.4122
1261
1280.54
52
53.1489
15
0.0222251
192
201.525
78
78.7536
420
421.949
49.5
49.9493
16
0.03934
128
128.263
78
78.6223
248
247.228
48
47.6547
17
-0.0134044
130
135.232
79
78.6966
276.5
278.643
50
49.5506
18
0.32807
616.5
627.226
84
84.6165
727.5
723.935
61
62.8172
19
-0.233811
240.5
248.933
83
84.6078
801
805.05
75
75.2968
20
-0.164134
140
140.931
85.5
85.8478
349
353.19
79
78.9348
Total number of rows: 21446 Table truncated, full table size 1306 Kbytes .Supplementary data files not provided