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Status
Public on Aug 01, 2004
Title
mouse aorta cross strain comparison, C3H_T00_NC_02
Sample type
RNA
Channel 1
Source name
mouse aorta cross strain comparison, times 0, 4, 10, 24, 40 weeks
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
mouse embryonic day 17.5 total RNA
Organism
Mus musculus
Extracted molecule
total RNA
Description
C3H denotes C3H/HeJ mice whereas C57 denotes C57Bl/6 mice T00 denotes baseline time point, whereas T04 means 4 weeks on diet, T08 means 8 weeks on diet and so on. HF denotes high-fat diet, whereas NC is normal chow diet Keywords = mouse aorta Keywords = cross strain comparison
Submission date
Jul 13, 2004
Last update date
May 27, 2005
Contact name
Raymond Tabibiazar
E-mail(s)
rtabibiazar@cvmed.stanford.edu
Phone
650-723-8222 ext 14604
Organization name
Stanford
Street address
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platform ID
GPL891
Series (1)
GSE1560
Aortas of mice on high fat diet
Data table header descriptions
ID_REF
VALUE
logRatio of value
CH1_Median
CH1 (F635) median fluorescence
CH1_MEAN
CH1 (F635) mean fluorescence intensity
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2 (F532) median fluorescence intensity
CH2_MEAN
CH2 (F532) mean fluorescence intensity
CH2_BKD_Median
CH2 (F532) background median fluorescence intensity
CH2_BKD_MEAN
CH2 (F532) background mean fluorescence intensity
Data table
ID_REF
VALUE
CH1_Median
CH1_MEAN
CH1BKD_Median
CH1BKD_Mean
CH2_Median
CH2_MEAN
CH2_BKD_Median
CH2_BKD_MEAN
1
-0.437319
352
378.359
70
70.7254
1672
1695.75
33
33.4225
2
0
79.5
79.7692
71
71.3489
67.5
68
33
33.4209
3
-0.388457
410
407.593
72
71.6035
1656
1655.85
33
32.9614
4
0.00738754
1030
1042
69.5
69.7
1868
1889.56
33
33.5724
5
-0.611626
248
246.033
71
70.1769
1456
1474.87
34
33.7906
6
0.207663
283.5
281.703
70
69.9317
323.5
326.875
33
33.6115
7
-0.845048
162
168.158
70
70.5795
1391
1408.81
33
33.1661
8
0.133095
110
107.667
70
70.2632
105
107.433
33
33.3895
9
-0.2862
81
81.4444
71
70.4
90.5
90.5556
35
35.4071
10
-0.0612343
167
167.87
71
70.8293
281.5
278.296
36
35.2787
11
0.00349605
98
100.161
71
70.9329
108
109.089
34
34.3958
12
-0.00815012
112.5
112.774
69
69.3029
135.5
136.968
33
33.3832
13
0.0687973
310
304.746
71
70.9239
464
465.102
34
33.7645
14
-0.799896
184.5
185.371
70
70.2584
1485.5
1493.52
34
34.4157
15
-0.161037
135.5
135.241
68
68.5213
237.5
239.052
34
34.0213
16
0.0667176
98
98.193
70
70.0037
100
99.7719
33
32.9851
17
-0.00698234
106
103.127
70
70.56
113
115.364
33
33.1673
18
0.28969
178
180.825
70
69.9686
167
168.508
33
33.2474
19
-0.0940113
162
166.213
69
69.4164
293
293.033
33
33.0706
20
-0.0769743
96
97.1961
70
69.6961
114
113.588
33
33.2756
Total number of rows: 21446 Table truncated, full table size 1308 Kbytes .Supplementary data files not provided