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Sample GSM241146 Query DataSets for GSM241146
Status Public on Nov 06, 2007
Title hem1 strain grown in YPD with 250 uM ALA (08-15-06_Philpott_YG_S98_1)
Sample type RNA
 
Source name 1-hem1 strain grown in YPD with 250 uM ALA
Organism Saccharomyces cerevisiae
Characteristics BY4742 hem1 delta strain
Extracted molecule total RNA
Extraction protocol Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol standard Affymetrix procedure
Scan protocol standard Affymetrix procedure
Description Gene expression data from hem1 strain under heme replete conditions (+ ALA)
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Nov 02, 2007
Last update date Aug 14, 2011
Contact name Olga Protchenko
E-mail(s) olgap@intra.niddk.nih.gov
Organization name National Institutes of health
Department NIDDK
Street address 10 Center Dr, Bldg.10-Rm.9B-05
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL90
Series (1)
GSE9514 Changes in gene expression in response to heme deficiency and hypoxia

Data table header descriptions
ID_REF Probe_set Id
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
10845_at 16.80215 A 0.62181556
10846_at 41.12503 P 0.009985438
10847_at 46.562984 P 8.05E-04
10848_at 116.46757 P 0.009985438
10849_at 28.987133 A 0.2674626
10850_at 19.679861 P 0.021866444
10806_at 9.681124 A 0.28474715
10807_at 790.4439 P 2.19E-04
10808_at 2.6620824 A 0.7654806
10809_g_at 23.930464 P 0.021866444
10810_i_at 20.464455 P 0.001864298
10811_at 53.094547 P 0.003584867
10812_s_at 13.250767 A 0.060419325
10813_s_at 65.78148 A 0.098054096
10814_s_at 165.4917 P 5.62E-04
10815_at 60.999954 P 0.002616955
10816_at 8.229943 A 0.33955786
10817_at 151.72884 P 0.001353854
10818_at 35.082706 P 0.013091824
10819_at 237.02487 P 0.002616955

Total number of rows: 9335

Table truncated, full table size 274 Kbytes.




Supplementary file Size Download File type/resource
GSM241146.CEL.gz 1.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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