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Platform GPL90 Query DataSets for GPL90
Status Public on Mar 11, 2002
Title [YG_S98] Affymetrix Yeast Genome S98 Array
Technology type in situ oligonucleotide
Distribution commercial
Organism Saccharomyces cerevisiae
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site

Has 9335 entries and was indexed 29-Jan-2002.
Contains probes for all known 6,400 yeast genes, and candidate open reading frames. Based primarily upon the December 1998 version of the Saccharomyces Genome Database (SGD).
Corresponds to strain S288C.
 
Description Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html

June 03, 2009: annotation table updated with netaffx build 28
June 08, 2012: annotation table updated with netaffx build 32
: annotation table updated with netaffx build
July 01, 2016: annotation table updated with netaffx build 35
 
Web link http://www.affymetrix.com/support/technical/byproduct.affx?product=yeast
http://www.affymetrix.com/analysis/index.affx
Submission date Feb 19, 2002
Last update date Jul 01, 2016
Organization Affymetrix, Inc.
E-mail(s) geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone 888-362-2447
URL http://www.affymetrix.com/index.affx
Street address
City Santa Clara
State/province CA
ZIP/Postal code 95051
Country USA
 
Samples (2445) GSM6219, GSM6220, GSM6221, GSM6222, GSM6223, GSM6224 
Series (166)
GSE423 Yeast aging study
GSE441 Yeast glucosamine treatment
GSE461 Response to LiCl of galactose grown cells

Data table header descriptions
ID Affymetrix Probe Set ID
ORF Entrez Gene Link
SPOT_ID identifies controls
Species Scientific Name The genus and species of the organism represented by the probe set.
Annotation Date The date that the annotations for this probe array were last updated. It will generally be earlier than the date when the annotations were posted on the Affymetrix web site.
Sequence Type
Sequence Source The database from which the sequence used to design this probe set was taken.
Target Description GenBank description associated with the representative public identifier. Blank for some probe sets.
Representative Public ID The accession number of a representative sequence. Note that for consensus-based probe sets, the representative sequence is only one of several sequences (sequence sub-clusters) used to build the consensus sequence and it is not directly used to derive the probe sequences. The representative sequence is chosen during array design as a sequence that is best associated with the transcribed region being interrogated by the probe set. Refer to the Sequence Source field to determine the database used.
Gene Title Title of Gene represented by the probe set.
Gene Symbol A gene symbol, when one is available (from UniGene).
ENTREZ_GENE_ID Entrez Gene Database UID
RefSeq Transcript ID
SGD accession number SGD accession number
Gene Ontology Biological Process Gene Ontology Consortium Biological Process derived from LocusLink. Each annotation consists of three parts: Accession Number // Description // Evidence. The description corresponds directly to the GO ID. The evidence can be direct, or extended.
Gene Ontology Cellular Component Gene Ontology Consortium Cellular Component derived from LocusLink. Each annotation consists of three parts: Accession Number // Description // Evidence. The description corresponds directly to the GO ID. The evidence can be direct, or extended.
Gene Ontology Molecular Function Gene Ontology Consortium Molecular Function derived from LocusLink. Each annotation consists of three parts: Accession Number // Description // Evidence. The description corresponds directly to the GO ID. The evidence can be direct, or extended.

Data table
ID ORF SPOT_ID Species Scientific Name Annotation Date Sequence Type Sequence Source Target Description Representative Public ID Gene Title Gene Symbol ENTREZ_GENE_ID RefSeq Transcript ID SGD accession number Gene Ontology Biological Process Gene Ontology Cellular Component Gene Ontology Molecular Function
10000_at YLR331C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR331C questionable ORF YLR331C
10001_at YLR332W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR332W Protein required for mating YLR332W O-glycosylated plasma membrane protein; acts as a sensor for cell wall integrity signaling and activates the pathway; interacts with Rom2p, a guanine nucleotide exchange factor for Rho1p, and with cell integrity pathway protein Zeo1p; MID2 has a paralog, MTL1, that arose from the whole genome duplication MID2 851042 NM_001182221 S000004324 0000767 // cell morphogenesis involved in conjugation // inferred from genetic interaction /// 0000767 // cell morphogenesis involved in conjugation // inferred from mutant phenotype /// 0001101 // response to acid // inferred from mutant phenotype /// 0006950 // response to stress // inferred from electronic annotation /// 0006970 // response to osmotic stress // inferred from genetic interaction /// 0030242 // peroxisome degradation // inferred from mutant phenotype /// 0030969 // UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response // inferred from mutant phenotype /// 0031505 // fungal-type cell wall organization // inferred from genetic interaction /// 0031505 // fungal-type cell wall organization // inferred from mutant phenotype 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral component of plasma membrane // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation /// 0043332 // mating projection tip // inferred from direct assay 0004888 // transmembrane signaling receptor activity // inferred from genetic interaction /// 0004888 // transmembrane signaling receptor activity // inferred from mutant phenotype /// 0004888 // transmembrane signaling receptor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred from physical interaction
10002_i_at YLR333C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR333C Ribosomal protein S25B (S31B) (rp45) (YS23) YLR333C ribosomal 40S subunit protein S25B RPS25B 851045 NM_001182222 0002181 // cytoplasmic translation // inferred by curator 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation 0003735 // structural constituent of ribosome // inferred from direct assay
10003_f_at YLR333C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR333C Ribosomal protein S25B (S31B) (rp45) (YS23) YLR333C Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S25, no bacterial homolog; RPS25B has a paralog, RPS25A, that arose from the whole genome duplication RPS25B 851045 NM_001182222 S000004325 0002181 // cytoplasmic translation // inferred by curator 0005737 // cytoplasm // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic annotation /// 0022627 // cytosolic small ribosomal subunit // inferred from direct assay /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation 0003735 // structural constituent of ribosome // inferred from direct assay
10004_at YLR334C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR334C questionable ORF YLR334C 0016021 // integral component of membrane // inferred from electronic annotation
10005_at YLR335W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR335W nuclear pore complex protein with central repetitive domain similar to that of NSP1 and NUP1 YLR335W Nucleoporin involved in nucleocytoplasmic transport; binds to either the nucleoplasmic or cytoplasmic faces of the nuclear pore complex depending on Ran-GTP levels; also has a role in chromatin organization NUP2 851048 NM_001182224 S000004327 0000061 // protein import into nucleus, substrate release // inferred from direct assay /// 0000972 // transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery // inferred from mutant phenotype /// 0000973 // posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery // inferred from mutant phenotype /// 0006348 // chromatin silencing at telomere // inferred from mutant phenotype /// 0006406 // mRNA export from nucleus // traceable author statement /// 0006407 // rRNA export from nucleus // traceable author statement /// 0006408 // snRNA export from nucleus // traceable author statement /// 0006409 // tRNA export from nucleus // traceable author statement /// 0006607 // NLS-bearing protein import into nucleus // inferred from genetic interaction /// 0006607 // NLS-bearing protein import into nucleus // inferred from mutant phenotype /// 0006608 // snRNP protein import into nucleus // traceable author statement /// 0006609 // mRNA-binding (hnRNP) protein import into nucleus // traceable author statement /// 0006610 // ribosomal protein import into nucleus // traceable author statement /// 0006611 // protein export from nucleus // inferred from genetic interaction /// 0006611 // protein export from nucleus // inferred from mutant phenotype /// 0006611 // protein export from nucleus // inferred from physical interaction /// 0006612 // protein targeting to membrane // inferred from mutant phenotype /// 0006810 // transport // inferred from electronic annotation /// 0006999 // nuclear pore organization // traceable author statement /// 0015031 // protein transport // inferred from electronic annotation /// 0016973 // poly(A)+ mRNA export from nucleus // inferred from mutant phenotype /// 0030466 // chromatin silencing at silent mating-type cassette // inferred from mutant phenotype /// 0031990 // mRNA export from nucleus in response to heat stress // inferred from mutant phenotype /// 0035392 // maintenance of chromatin silencing at telomere // inferred from mutant phenotype /// 0036228 // protein targeting to nuclear inner membrane // inferred from mutant phenotype /// 0046907 // intracellular transport // inferred from electronic annotation /// 0051028 // mRNA transport // inferred from electronic annotation /// 0070481 // nuclear-transcribed mRNA catabolic process, non-stop decay // inferred from mutant phenotype 0000790 // nuclear chromatin // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005643 // nuclear pore // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // not recorded /// 0031965 // nuclear membrane // inferred from electronic annotation /// 0044614 // nuclear pore cytoplasmic filaments // inferred from direct assay /// 0044615 // nuclear pore nuclear basket // inferred from direct assay 0005198 // structural molecule activity // traceable author statement /// 0005487 // nucleocytoplasmic transporter activity // inferred from genetic interaction /// 0005487 // nucleocytoplasmic transporter activity // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction /// 0008536 // Ran GTPase binding // inferred from physical interaction
10006_at YLR336C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR336C Suppressor of Glycerol Defect YLR336C Essential nuclear protein; required for biogenesis of the small ribosomal subunit; has a possible role in the osmoregulatory glycerol response; putative homolog of human NOM1 which is implicated in acute myeloid leukemia SGD1 851049 NM_001182225 S000004328 0006972 // hyperosmotic response // inferred from genetic interaction /// 0042274 // ribosomal small subunit biogenesis // inferred from mutant phenotype 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 0005634 // nucleus // inferred from sequence or structural similarity /// 0005730 // nucleolus // inferred from direct assay /// 0005730 // nucleolus // inferred from electronic annotation /// 0097078 // FAl1-SGD1 complex // inferred from physical interaction 0003723 // RNA binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical interaction
10007_at YLR337C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR337C Proline-rich protein verprolin YLR337C Proline-rich actin-associated protein; involved in cytoskeletal organization and cytokinesis; promotes actin nucleation and endocytosis; related to mammalian Wiskott-Aldrich syndrome protein (WASP)-interacting protein (WIP) VRP1 851051 NM_001182226 S000004329 0006897 // endocytosis // inferred from mutant phenotype /// 0007015 // actin filament organization // inferred from physical interaction /// 0007121 // bipolar cellular bud site selection // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from genetic interaction /// 0030036 // actin cytoskeleton organization // inferred from mutant phenotype /// 0030036 // actin cytoskeleton organization // inferred from physical interaction /// 0032465 // regulation of cytokinesis // inferred from mutant phenotype /// 0051666 // actin cortical patch localization // inferred from mutant phenotype 0000131 // incipient cellular bud site // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005856 // cytoskeleton // inferred from electronic annotation /// 0005935 // cellular bud neck // inferred from direct assay /// 0030479 // actin cortical patch // inferred from direct assay /// 0043332 // mating projection tip // inferred from direct assay 0003779 // actin binding // inferred from electronic annotation /// 0003779 // actin binding // inferred from physical interaction /// 0005515 // protein binding // inferred from physical interaction
10008_at YLR338W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR338W questionable ORF YLR338W 0016021 // integral component of membrane // inferred from electronic annotation
10009_at YLR339C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR339C questionable ORF YLR339C 0016021 // integral component of membrane // inferred from electronic annotation
10010_at YLR295C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR295C ATP synthase subunit h YLR295C Subunit h of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; protein abundance increases in response to DNA replication stress ATP14 851002 NM_001182183 S000004286 0006200 // ATP catabolic process // inferred from direct assay /// 0006754 // ATP biosynthetic process // inferred from electronic annotation /// 0006810 // transport // inferred from electronic annotation /// 0006811 // ion transport // inferred from electronic annotation /// 0015986 // ATP synthesis coupled proton transport // inferred from direct assay /// 0015986 // ATP synthesis coupled proton transport // inferred from mutant phenotype /// 0015986 // ATP synthesis coupled proton transport // inferred from physical interaction /// 0015992 // proton transport // inferred from electronic annotation /// 0033615 // mitochondrial proton-transporting ATP synthase complex assembly // inferred from mutant phenotype /// 0042407 // cristae formation // inferred from mutant phenotype 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from mutant phenotype /// 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) // inferred from physical interaction /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005743 // mitochondrial inner membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // not recorded /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o) // inferred from electronic annotation 0016887 // ATPase activity // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from direct assay /// 0046933 // proton-transporting ATP synthase activity, rotational mechanism // inferred from mutant phenotype /// 0046961 // proton-transporting ATPase activity, rotational mechanism // inferred from direct assay
10011_at YLR296W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR296W hypothetical protein YLR296W 0016021 // integral component of membrane // inferred from electronic annotation
10012_at YLR297W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR297W weak similarity to Vibrio vulnificus VvpC protein YLR297W Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; not an essential gene; induced by treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from nucleus to vacuole upon DNA replication stress; YLR297W has a paralog, YOR186W, that arose from the whole genome duplication YLR297W 851004 NM_001182185 S000004288 0000324 // fungal-type vacuole // inferred from direct assay /// 0000329 // fungal-type vacuole membrane // inferred from direct assay /// 0005634 // nucleus // inferred from direct assay /// 0005737 // cytoplasm // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation
10013_at YLR298C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR298C U1 snRNP protein required for pre-mRNA splicing YLR298C Component of the U1 snRNP complex required for pre-mRNA splicing; putative ortholog of human U1C protein, which is involved in formation of a complex between U1 snRNP and the pre-mRNA 5' splice site YHC1 851005 NM_001182186 S000004289 0000387 // spliceosomal snRNP assembly // inferred from electronic annotation /// 0000395 // mRNA 5'-splice site recognition // inferred from electronic annotation /// 0000395 // mRNA 5'-splice site recognition // inferred from mutant phenotype /// 0000398 // mRNA splicing, via spliceosome // inferred from electronic annotation /// 0000398 // mRNA splicing, via spliceosome // inferred from physical interaction 0000243 // commitment complex // inferred from electronic annotation /// 0000243 // commitment complex // inferred from physical interaction /// 0005634 // nucleus // inferred from electronic annotation /// 0005685 // U1 snRNP // inferred from direct assay /// 0005685 // U1 snRNP // inferred from electronic annotation /// 0030529 // ribonucleoprotein complex // inferred from electronic annotation /// 0071004 // U2-type prespliceosome // inferred from direct assay /// 0071004 // U2-type prespliceosome // inferred from electronic annotation 0003676 // nucleic acid binding // inferred from electronic annotation /// 0003723 // RNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from electronic annotation /// 0003729 // mRNA binding // inferred from physical interaction /// 0008270 // zinc ion binding // inferred from electronic annotation /// 0030619 // U1 snRNA binding // inferred from electronic annotation /// 0030627 // pre-mRNA 5'-splice site binding // inferred from direct assay /// 0046872 // metal ion binding // inferred from electronic annotation
10014_at YLR299W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR299W gamma-glutamyltransferase homolog YLR299W Gamma-glutamyltranspeptidase; major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation ECM38 851006 NM_001182187 S000004290 0006508 // proteolysis // inferred from electronic annotation /// 0006749 // glutathione metabolic process // inferred from electronic annotation /// 0006751 // glutathione catabolic process // inferred from mutant phenotype /// 0006805 // xenobiotic metabolic process // inferred from mutant phenotype 0000324 // fungal-type vacuole // inferred from direct assay /// 0005773 // vacuole // inferred from electronic annotation /// 0005774 // vacuolar membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral component of membrane // inferred from electronic annotation 0003840 // gamma-glutamyltransferase activity // inferred from electronic annotation /// 0003840 // gamma-glutamyltransferase activity // inferred from mutant phenotype /// 0008233 // peptidase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016746 // transferase activity, transferring acyl groups // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0036374 // glutathione hydrolase activity // inferred from electronic annotation
10015_at YLR300W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR300W Exo-1,3-beta-glucanase YLR300W Major exo-1,3-beta-glucanase of the cell wall; involved in cell wall beta-glucan assembly; exists as three differentially glycosylated isoenzymes; EXG1 has a paralog, SPR1, that arose from the whole genome duplication EXG1 851007 NM_001182188 S000004291 0005975 // carbohydrate metabolic process // inferred from electronic annotation /// 0006073 // cellular glucan metabolic process // inferred from genetic interaction /// 0006073 // cellular glucan metabolic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0031505 // fungal-type cell wall organization // inferred from sequence or structural similarity 0005576 // extracellular region // inferred from direct assay /// 0005576 // extracellular region // inferred from electronic annotation /// 0005618 // cell wall // inferred from electronic annotation /// 0009277 // fungal-type cell wall // inferred from direct assay 0003824 // catalytic activity // inferred from electronic annotation /// 0004338 // glucan exo-1,3-beta-glucosidase activity // inferred from electronic annotation /// 0004338 // glucan exo-1,3-beta-glucosidase activity // inferred from sequence or structural similarity /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from electronic annotation /// 0016798 // hydrolase activity, acting on glycosyl bonds // inferred from electronic annotation /// 0043169 // cation binding // inferred from electronic annotation
10016_at YLR301W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR301W hypothetical protein YLR301W Protein of unknown function that interacts with Sec72p and Hrr25p HRI1 851008 NM_001182189 S000004292 0006613 // cotranslational protein targeting to membrane // inferred from physical interaction 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane // inferred from physical interaction
10017_at YLR302C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR302C questionable ORF YLR302C 0016021 // integral component of membrane // inferred from electronic annotation
10018_at YLR303W Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR303W O-Acetylhomoserine-O-Acetylserine Sulfhydralase YLR303W O-acetyl homoserine-O-acetyl serine sulfhydrylase; required for Methionine and cysteine biosynthesis MET17 851010 NM_001182191 S000004294 0006520 // cellular amino acid metabolic process // inferred from electronic annotation /// 0006555 // methionine metabolic process // inferred from mutant phenotype /// 0008152 // metabolic process // inferred from electronic annotation /// 0008652 // cellular amino acid biosynthetic process // inferred from electronic annotation /// 0009086 // methionine biosynthetic process // inferred from electronic annotation /// 0019344 // cysteine biosynthetic process // inferred from electronic annotation /// 0019344 // cysteine biosynthetic process // traceable author statement /// 0071266 // 'de novo' L-methionine biosynthetic process // inferred from electronic annotation 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0005886 // plasma membrane // inferred from direct assay 0003824 // catalytic activity // inferred from electronic annotation /// 0003961 // O-acetylhomoserine aminocarboxypropyltransferase activity // inferred from direct assay /// 0003961 // O-acetylhomoserine aminocarboxypropyltransferase activity // inferred from electronic annotation /// 0003961 // O-acetylhomoserine aminocarboxypropyltransferase activity // traceable author statement /// 0004124 // cysteine synthase activity // inferred from direct assay /// 0004124 // cysteine synthase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred from electronic annotation /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups // inferred from electronic annotation /// 0030170 // pyridoxal phosphate binding // inferred from electronic annotation
10019_at YLR304C Saccharomyces cerevisiae Oct 6, 2014 Exemplar sequence Saccharomyces Genome Database YLR304C Aconitase, mitochondrial YLR304C Aconitase; required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; phosphorylated; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy ACO1 851013 NM_001182192 S000004295 0000002 // mitochondrial genome maintenance // inferred from mutant phenotype /// 0006099 // tricarboxylic acid cycle // inferred from direct assay /// 0006099 // tricarboxylic acid cycle // inferred from electronic annotation /// 0006101 // citrate metabolic process // traceable author statement /// 0006537 // glutamate biosynthetic process // traceable author statement /// 0008152 // metabolic process // inferred from electronic annotation /// 0019541 // propionate metabolic process // inferred from expression pattern 0005737 // cytoplasm // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotation /// 0005758 // mitochondrial intermembrane space // traceable author statement /// 0005759 // mitochondrial matrix // inferred from direct assay /// 0005829 // cytosol // inferred from direct assay /// 0042645 // mitochondrial nucleoid // inferred from direct assay 0003690 // double-stranded DNA binding // inferred from direct assay /// 0003697 // single-stranded DNA binding // inferred from direct assay /// 0003994 // aconitate hydratase activity // inferred from direct assay /// 0003994 // aconitate hydratase activity // inferred from electronic annotation /// 0003994 // aconitate hydratase activity // inferred from mutant phenotype /// 0016829 // lyase activity // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from electronic annotation /// 0051536 // iron-sulfur cluster binding // inferred from electronic annotation /// 0051539 // 4 iron, 4 sulfur cluster binding // inferred from electronic annotation /// 0052633 // isocitrate hydro-lyase (cis-aconitate-forming) activity // inferred from electronic annotation

Total number of rows: 9335

Table truncated, full table size 13006 Kbytes.






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