|
| Status |
Public on Oct 19, 2007 |
| Title |
strain NL2099 replicate 1 |
| Sample type |
RNA |
| |
|
| Source name |
Whole C.elegans, larva 4 stage
|
| Organism |
Caenorhabditis elegans |
| Characteristics |
rrf-3 mutant strain: NL2099 (pk1426). Whole C.elegans, larva 4 stage
|
| Treatment protocol |
No treatment
|
| Growth protocol |
fed with OP50 E.coli
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Ribopure Total RNA isolation kit
|
| Label |
biotin
|
| Label protocol |
According to Affymetrix protocol
|
| |
|
| Hybridization protocol |
According to Affymetrix protocol
|
| Scan protocol |
According to Affymetrix protocol
|
| Description |
NL2099 independent biological replicate 1. Asikainen et al., (2007) Whole genome microarray analysis of rrf-3 and eri-1 mutant C.elegans.
|
| Data processing |
Robust Multichip Average (RMA) -algorithm was used for normalization and statistical processing (Bolstad et al., 2003).
|
| |
|
| Submission date |
Aug 02, 2007 |
| Last update date |
Aug 14, 2011 |
| Contact name |
Suvi Tuulia Asikainen |
| E-mail(s) |
suvi.asikainen@helsinki.fi
|
| Phone |
+358503311688
|
| Organization name |
Karolinska Institutet
|
| Department |
CLINTEC
|
| Lab |
Outi Hovatta's lab
|
| Street address |
Karolinska University Hospital
|
| City |
Stockholm |
| State/province |
Huddinge |
| ZIP/Postal code |
14186 |
| Country |
Sweden |
| |
|
| Platform ID |
GPL200 |
| Series (1) |
| GSE8659 |
Whole genome microarray analysis of C. elegans rrf-3 and eri-1 mutants |
|
