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Sample GSM2113448 Query DataSets for GSM2113448
Status Public on Apr 12, 2016
Title KMS11 normoxia
Sample type RNA
Source name KMS11 normoxia
Organism Homo sapiens
Characteristics oxygen status: normoxia
cell line: KMS11
cell type: myeloma
Treatment protocol RPMI1640 plus 10% FCS.
Growth protocol normoxia: 21%O2, hypoxia: 1%O2.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with Trizol.
Label Cy3
Label protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Hybridization protocol As materials and methods for DNA mycroarray protocol version 6.7 (Agilent).
Scan protocol Agilent G2600A SureScan Microarray Scanner System.
Description SAMPLE 3
Data processing GeneSpring (Agilent), computed normalized signal intensity with 75%tile normalization.
Submission date Apr 11, 2016
Last update date Apr 12, 2016
Contact name Sho Ikeda
Organization name Akita univ.
Department Hematology
Lab Tagawa labo
Street address Hondo 1-1-1
City Akita
ZIP/Postal code 010-8543
Country Japan
Platform ID GPL17077
Series (1)
GSE80140 Gene expression of myeloma cell lines under hypoxia

Data table header descriptions
VALUE Log2 normalized value

Data table
A_23_P117082 -0.14354324
A_33_P3246448 -0.32684708
A_33_P3318220 -0.87297106
A_33_P3236322 -1.0008621
A_33_P3319925 -0.8412204
A_21_P0000509 -0.6371074
A_21_P0000744 2.866127
A_24_P215804 0.02631569
A_23_P110167 0.75736094
A_33_P3211513 0.13906908
A_23_P103349 -0.9552841
A_32_P61480 -0.7760005
A_33_P3788124 -0.7751789
A_33_P3414202 0.05282259
A_33_P3316686 -0.9947219
A_33_P3300975 -2.7972746
A_33_P3263061 -0.02786398
A_33_P3261373 0.2155056
A_24_P278460 0.74724627
A_21_P0013109 -0.46017456

Total number of rows: 50737

Table truncated, full table size 1219 Kbytes.

Supplementary file Size Download File type/resource
GSM2113448_SG13344329_253949429818_S001_GE1_1105_Oct12_1_3.txt.gz 3.0 Mb (ftp)(http) TXT
Processed data included within Sample table

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