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| Status |
Public on Nov 08, 2007 |
| Title |
HLH-1 induction 4 hour replicate A (11-16-04_Krause_Celegans_H4A) |
| Sample type |
RNA |
| |
|
| Source name |
H4A
|
| Organism |
Caenorhabditis elegans |
| Characteristics |
embryonic heat shock HLH-1
|
| Extracted molecule |
total RNA |
| Extraction protocol |
standard Affymetrix procedures
|
| Label |
biotin
|
| Label protocol |
standard Affymetrix procedure
|
| |
|
| Hybridization protocol |
standard Affymetrix procedure
|
| Scan protocol |
standard Affymetrix procedure
|
| Description |
4 hour replicate A
|
| Data processing |
Affymetrix Microarray Suite version 5.0
|
| |
|
| Submission date |
Jun 22, 2007 |
| Last update date |
Aug 14, 2011 |
| Contact name |
WeiPing Chen |
| E-mail(s) |
weipingChen@niddk.nih.gov
|
| Phone |
301-496-0175
|
| Organization name |
NIDDK/NIH
|
| Department |
GCL
|
| Lab |
Genomics Core Lab
|
| Street address |
Bldg 8, Room 1A11, NIDDK/NIH
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL200 |
| Series (1) |
| GSE8231 |
The embryonic muscle transcriptome of C. elegans |
|
| Data table header descriptions |
| ID_REF |
Probe_set Id |
| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| 180134_at |
65.9 |
A |
0.5 |
| 180135_at |
40.2 |
A |
0.696289 |
| 180101_s_at |
601.1 |
P |
0.018555 |
| 180102_at |
28.9 |
A |
0.780518 |
| 180103_at |
116.9 |
A |
0.334473 |
| 180073_s_at |
7.2 |
A |
0.72583 |
| 180074_at |
8.3 |
A |
0.74707 |
| 180075_s_at |
225.1 |
A |
0.19458 |
| 180150_at |
120.7 |
A |
0.334473 |
| 180151_s_at |
33.1 |
A |
0.466064 |
| 180152_at |
37.4 |
A |
0.601074 |
| 180153_s_at |
127.5 |
A |
0.129639 |
| 180154_at |
11.4 |
A |
0.943848 |
| 180155_at |
17.7 |
A |
0.943848 |
| 180156_at |
132.1 |
A |
0.19458 |
| 180157_at |
192.3 |
P |
0.046143 |
| 180158_at |
248.5 |
A |
0.171387 |
| 180159_at |
87.2 |
A |
0.334473 |
| 180160_at |
85.0 |
A |
0.398926 |
| 180161_at |
175.3 |
A |
0.246094 |
Total number of rows: 22625
Table truncated, full table size 593 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM203616.CEL.gz |
3.2 Mb |
(ftp)(http) |
CEL |
| Processed data included within Sample table |
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