GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM190785
Query DataSets for GSM190785
Status
Public on Jun 27, 2007
Title
post-ES_EpiSC-5
Sample type
RNA
Source name
EpiSC line EpiSC-5
Organism
Mus musculus
Characteristics
undifferentiated
Growth protocol
grown on irradiated MEFs in DMEM with 15% KSR, BME, NEAA, L-glutamine, & FGF2
Extracted molecule
total RNA
Extraction protocol
TRIzol
Label
cy3
Label protocol
Agilent labeling kit
Hybridization protocol
according to standard Agilent protocol.
Scan protocol
Agilent scanner and software
Description
none
Data processing
Agilent Feature Extraction software; gProcessedSignal; processed Cy3 Signal
Submission date
May 21, 2007
Last update date
Jun 25, 2007
Contact name
Paul Tesar
E-mail(s)
paul.tesar@case.edu
Organization name
Case Western Reserve University
Department
Genetics & Genome Sciences
Street address
10900 Euclid Ave.
City
Cleveland
State/province
Ohio
ZIP/Postal code
44106
Country
USA
Platform ID
GPL4134
Series (2)
GSE7866
Gene expression comparison of mouse ES cells and EpiSCs
GSE7902
Novel cell lines from mouse epiblast share defining features with human embryonic stem cells
Data table header descriptions
ID_REF
VALUE
gProcessedSignal
Data table
ID_REF
VALUE
1
1.09E+05
2
4.08E+00
3
3.73E+00
4
3.75E+00
5
3.76E+00
6
3.79E+00
7
3.77E+00
8
3.78E+00
9
3.79E+00
10
3.79E+00
11
3.79E+00
12
3.80E+00
13
1.33E+02
14
3.02E+01
15
3.24E+01
16
6.72E+02
18
2.21E+01
19
3.81E+00
20
1.52E+01
21
3.35E+01
Total number of rows:
45018
Table truncated, full table size
648 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM190785.txt.gz
6.6 Mb
(ftp)
(http)
TXT
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
