|
| Status |
Public on Oct 14, 2015 |
| Title |
151892 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
RCC (primitive)
|
| Organism |
Homo sapiens |
| Characteristics |
sample type: RCC ,TFE
tissue: RCC (primitive)
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from fresh, frozen or formol fixed-paraffin embedded fragments using Qiamp DNA mini kit.
|
| Label |
Cy5
|
| Label protocol |
DNA was labeled with the sureTag labeling kit accirding the agilent protocol
|
| |
|
| Channel 2 |
| Source name |
Female DNA control provided in SureTag Labeling Kit
|
| Organism |
Homo sapiens |
| Characteristics |
sample type: commercial DNA from cell lines
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from fresh, frozen or formol fixed-paraffin embedded fragments using Qiamp DNA mini kit.
|
| Label |
Cy3
|
| Label protocol |
DNA was labeled with the sureTag labeling kit accirding the agilent protocol
|
| |
|
| |
| Hybridization protocol |
DNA was hybridized with the hybridization kit according the Agilent protocol
|
| Scan protocol |
We used a Surescan provided by Agilent and controled by SureScan Software
|
| Data processing |
the data was processed on Cytogenomics 2.9.1.3 using the Default Analysis Method - CGH v2 proposed by Agilent
|
| |
|
| Submission date |
Oct 13, 2015 |
| Last update date |
Oct 14, 2015 |
| Contact name |
annie peyron |
| E-mail(s) |
acpeyron@unice.fr
|
| Organization name |
CHU Nice
|
| Lab |
LGTS
|
| Street address |
28 av Valombrose
|
| City |
Nice |
| ZIP/Postal code |
06107 |
| Country |
France |
| |
|
| Platform ID |
GPL10123 |
| Series (1) |
| GSE73979 |
3 cases of renal cell carcinomas with TFEB amplification |
|
