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Sample GSM1687394 Query DataSets for GSM1687394
Status Public on May 01, 2018
Title Lesional dermis from psoriatic skin, sample 14, set 2
Sample type RNA
Source name Human lesional psoriatic dermis (laser capture microdissection), sample 14
Organism Homo sapiens
Characteristics disease state: psoriasis
tissue: dermis
gender: male
age: 31y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human lesional psoriatic dermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date May 01, 2018
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68939 Gene epression in healthy and lesional psoriatic dermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 16.00208459
2 4.866079308
3 4.815741621
4 6.795237632
5 5.541119671
6 6.22232629
7 8.698750652
8 11.64350144
9 5.180436089
10 6.57081573
11 4.961773521
12 8.66875469
13 9.061676966
14 11.93941879
15 7.295201791
16 4.653246025
17 6.078166697
18 4.731359445
19 5.451647782
20 7.696016384

Total number of rows: 62976

Table truncated, full table size 1091 Kbytes.

Supplementary file Size Download File type/resource
GSM1687394_PN14DL.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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