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Sample GSM1687383 Query DataSets for GSM1687383
Status Public on Jun 14, 2017
Title Epidermis from healthy skin, sample 4, set 2
Sample type RNA
Source name Human healthy epidermis (laser capture microdissection), sample 4
Organism Homo sapiens
Characteristics disease state: control
tissue: epidermis
gender: female
age: 55y
Extracted molecule total RNA
Extraction protocol RNA was isolated with Arcturus Picopure RNA isolation Kit according to manufacturer's protocol
Label Cy3
Label protocol 10 ng RNA were amplified with ExpressArt Kit and labeled (Cy3) with One-color microarray-based Gene Expression Analysis Low Input Quick Amp WT Labeling (Agilent Technologies) according to manufacturer's protocol
Hybridization protocol 1.5 ug of Cy3-labelled cRNA was hybridized with Human Gene Expression Microarray 8x60K chip (Agilent Technologies) according to manufacturer's protocol
Scan protocol Slides were scanned with the Agilent G2505B scanner.
Description Gene expression in human healthy epidermis
Data processing Images were quantified using Agilent Feature Extraction Software (version V. Data were background-corrected with 'normexp' option and quantile normalized using limma R package.
Submission date May 15, 2015
Last update date Jun 14, 2017
Contact name Denis A Mogilenko
Organization name INSERM
Department U1011
Street address 1 Rue du Professeur Calmette, BP245
City Lille
ZIP/Postal code 59019
Country France
Platform ID GPL13607
Series (1)
GSE68937 Gene expression in healthy and lesional psoriatic epidermis from human skin biopsies (laser capture microdissection): set 2

Data table header descriptions
VALUE Normalized Log2 signal intensity

Data table
1 15.91709281
2 4.760455758
3 4.49853243
4 5.794963669
5 5.170769444
6 5.856431616
7 8.739429858
8 12.12296959
9 4.919868138
10 6.02098537
11 4.692338541
12 7.365777774
13 7.580731494
14 12.29412419
15 5.824964962
16 4.217832644
17 6.007967135
18 5.889256387
19 4.919868138
20 7.570015646

Total number of rows: 62976

Table truncated, full table size 1090 Kbytes.

Supplementary file Size Download File type/resource
GSM1687383_CN4Eh.txt.gz 12.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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