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Sample GSM1626630 Query DataSets for GSM1626630
Status Public on Sep 28, 2015
Title AGO_2 (gene)
Sample type RNA
Source name Original Agilent Human Universal Reference RNA
Organism Homo sapiens
Characteristics sample type: pure reference RNA (AGO)
Extracted molecule total RNA
Extraction protocol Samples used in the study are commercially available RNAs derived from mixture of multiple cell lines and RNAs extracted from patient bone marrow specimens
Label biotin
Label protocol 50 ng of starting RNAs were amplified with NuGEN Ovation PicoSL WTA V2 kit and 2,500 ng of biotin-labeled cDNAs were hybridized.
Hybridization protocol Labeled cDNAs were hybridized onto Affymetrix Human Gene 1.0 ST Arrays (Gene1.0) following Affymetrix standard protocols.
Scan protocol Array scanning was performed according to the manufacturer's instruction (Affymetrix).
Description replicate_2
Data processing Raw data were processed with the Expression Console (Affymetrix) for background correction and normalization, and both probeset (exon) and gene (transcript cluster) level data were generated.
Submission date Mar 06, 2015
Last update date Sep 28, 2015
Contact name Jinsheng Yu
Organization name Washington University School of Medicine
Department Genetics
Lab GTAC Lab
Street address 660 S. Euclid Ave.
City St. Louis
State/province MO
ZIP/Postal code 63110
Country USA
Platform ID GPL6244
Series (2)
GSE66628 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology (Affymetrix_Gene1.0) (exon analysis)
GSE66649 Multi-platform assessment of transcriptional profiling technologies utilizing a precise probe mapping methodology
Alternative to GSM1626592 (exon-level analysis)

Data table header descriptions
VALUE Quantification

Data table
7892501 6.43064
7892502 4.70723
7892503 3.45218
7892504 9.01703
7892505 2.00183
7892506 3.24108
7892507 5.68678
7892508 5.375
7892509 12.1794
7892510 3.81246
7892511 3.60804
7892512 5.23408
7892513 2.40236
7892514 10.2342
7892515 9.81624
7892516 7.88489
7892517 5.53007
7892518 1.42102
7892519 4.63209
7892520 9.83043

Total number of rows: 33297

Table truncated, full table size 516 Kbytes.

Supplementary file Size Download File type/resource
GSM1626630_23019.CEL.gz 3.8 Mb (ftp)(http) CEL
GSM1626630_23019.rma-gene-default.chp.gz 256.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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