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Sample GSM158359 Query DataSets for GSM158359
Status Public on Jan 26, 2007
Title anN1 P9 hair follicle, biological rep1
Sample type RNA
 
Source name hair follicles from anagen-deleted area (presence of functional Notch1)
Organism Mus musculus
Characteristics hair bulbs only from 9-day-old mice
Extracted molecule total RNA
Extraction protocol RNeasy mini kit (Qiagen, CA)
Label biotin
Label protocol refer to Washington University Genechip Core Facility
 
Hybridization protocol refer to Washington University Genechip Core Facility
Scan protocol refer to Washington University Genechip Core Facility
Description Gene expression data from anN1 hair bulb.
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date Jan 25, 2007
Last update date Aug 28, 2018
Contact name Raphael Kopan
E-mail(s) raphael.kopan@cchmc.org
Organization name Cincinnati Children's Hospital
Department Developmental Biology
Lab Kopan Lab
Street address 3333 Burnet Avenue
City Cincinnati
State/province Ohio
ZIP/Postal code 45011
Country USA
 
Platform ID GPL1261
Series (1)
GSE6867 Expression data in the absence of Notch1 in hair follicles
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal
ABS_CALL indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION-P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION-P-VALUE
AFFX-BioB-5_at 191.691 A 0.15671
AFFX-BioB-M_at 83.0858 A 0.131361
AFFX-BioB-3_at 12.6232 A 0.927318
AFFX-BioC-5_at 174.46 A 0.205712
AFFX-BioC-3_at 13.1865 A 0.981719
AFFX-BioDn-5_at 5.3681 A 0.993813
AFFX-BioDn-3_at 50.1657 A 0.984817
AFFX-CreX-5_at 11.3805 A 0.949771
AFFX-CreX-3_at 394.692 P 0.00179591
AFFX-DapX-5_at 53.2373 A 0.41138
AFFX-DapX-M_at 63.7043 A 0.659339
AFFX-DapX-3_at 67.319 A 0.529762
AFFX-LysX-5_at 90038.9 P 4.42873e-05
AFFX-LysX-M_at 131786 P 4.42873e-05
AFFX-LysX-3_at 130765 P 4.42873e-05
AFFX-PheX-5_at 50232.3 P 4.42873e-05
AFFX-PheX-M_at 106792 P 4.42873e-05
AFFX-PheX-3_at 108356 P 4.42873e-05
AFFX-ThrX-5_at 4721.51 P 4.42873e-05
AFFX-ThrX-M_at 33808.6 P 4.42873e-05

Total number of rows: 45101

Table truncated, full table size 1377 Kbytes.




Supplementary file Size Download File type/resource
GSM158359.cel.gz 3.5 Mb (ftp)(http) CEL

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