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Sample GSM1394745 Query DataSets for GSM1394745
Status Public on Nov 10, 2014
Title DNA_methylation_ENDO_replicate_1
Sample type genomic
Source name endometriosis-affected women
Organism Homo sapiens
Characteristics tissue: choriodecidua
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from samples using Qiagen DNeasy Kit according to standard instructions
Label Cy3, Cy5
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450K Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description maternal-fetal interface during pregnancy
Data processing BeadStudio software v3.2
Non-normalized data.txt file contains unmethylated and methylated signal intensities
Submission date May 20, 2014
Last update date Nov 10, 2014
Contact name Céline Méhats
Organization name Inserm
Department U1016
Street address 24 rue du Faubourg St jacques
City Paris
ZIP/Postal code 75014
Country France
Platform ID GPL13534
Series (2)
GSE57831 Profile of differential expression and DNA methylation status in choriodecidua of women affected with severe endometriosis [DNA methylation]
GSE57832 Expression and methylation profiles of choriodecidua from pregnant women affected with deep endometriosis

Data table header descriptions
VALUE Average Beta
Detection Pval

Data table
ID_REF VALUE Detection Pval
cg00000029 0.2315878 0
cg00000108 0.9085969 0
cg00000109 0.8582287 0
cg00000165 0.4153203 0
cg00000236 0.7553895 0
cg00000289 0.6740918 0
cg00000292 0.6751401 0
cg00000321 0.449294 0
cg00000363 0.3402209 0
cg00000622 0.02418681 0
cg00000658 0.8006442 0
cg00000714 0.1310739 0
cg00000721 0.906916 0
cg00000734 0.0893852 0
cg00000769 0.09866048 0
cg00000807 0.5993055 0
cg00000884 0.7236946 0
cg00000905 0.09036729 0
cg00000924 0.5542806 0
cg00000948 0.7593184 0

Total number of rows: 485577

Table truncated, full table size 10964 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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