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Sample GSM1180924 Query DataSets for GSM1180924
Status Public on Dec 28, 2013
Title LU134-MAX
Sample type RNA
Source name LU134-MAX
Organism Homo sapiens
Characteristics cell line: LU134
cell type: Small Cell Lung Cancer (SCLC)
Treatment protocol Not special additional treatment
Growth protocol Cells where growth on RPMI media with 10% FBS, 1% PS
Extracted molecule total RNA
Extraction protocol Total mRNA where extrated using Trizol Reagent.
Label Cy3
Label protocol Amount of nucleic acid labeled: 100ng. Commercial One-Color Microarray-Based Gene Expression Analysis” v.6.6 kit by following manufacturer instructions. Agilent manual G4140-90040 of September 2012. Amplification: by RNA polymerases.
Hybridization protocol Microarray: SurePrint G3 Human Gene Expression 8x60K v2 Microarray (Agilent microarray design ID 039494)
Scan protocol Scanned on an G2505C DNA microarray scanner (Agilent).
Data processing Images were quantified using Agilent Feature Extraction Software (ver. 10.7)
Submission date Jul 05, 2013
Last update date Dec 29, 2013
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
Platform ID GPL17077
Series (1)
GSE48559 Identification of MAX signature on MAX deficient SCLC cell lines

Data table header descriptions
VALUE Normalized signal intensity

Data table
GE_BrightCorner 16.31033328
DarkCorner 4.817005845
A_23_P117082 12.15582122
A_33_P3246448 5.721632895
A_33_P3318220 4.666918525
A_33_P3236322 5.464979177
A_33_P3319925 5.560802098
A_21_P0000509 15.25868145
A_21_P0000744 12.20606895
A_24_P215804 8.314709444
A_23_P110167 12.70983352
A_33_P3211513 9.138065732
A_23_P103349 5.518407861
A_32_P61480 5.560802098
A_33_P3788124 4.944991989
A_33_P3414202 9.036227246
A_33_P3316686 9.96593266
A_33_P3300975 10.98750291
A_33_P3263061 13.85654577
A_33_P3261373 4.900602043

Total number of rows: 50739

Table truncated, full table size 1260 Kbytes.

Supplementary file Size Download File type/resource
GSM1180924_202_1_2.txt.gz 12.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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