|
Status |
Public on Sep 28, 2012 |
Title |
HudsonAlpha_ChipSeq_ECC-1_YY1_(SC-281)_v042211.1 |
Sample type |
SRA |
|
|
Source name |
ECC-1
|
Organism |
Homo sapiens |
Characteristics |
datatype: ChipSeq datatype description: Chromatin IP Sequencing antibody antibodydescription: Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin. Antibody Target: YY1 antibody targetdescription: YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins. The protein is involved in repressing and activating a diverse number of promoters. YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1 antibody vendorname: Santa Cruz Biotechnology antibody vendorid: sc-281 controlid: SL13506 labexpid: SL13273,SL14584 softwareversion: MACS cell sex: F antibody: YY1_(SC-281) antibody antibodydescription: Rabbit polyclonal IgG, epitope mapping at the C-terminus of YY1 of human origin. Antibody Target: YY1 antibody targetdescription: YY1 is a ubiquitously distributed transcription factor belonging to the GLI-Kruppel class of zinc finger proteins. The protein is involved in repressing and activating a diverse number of promoters. YY1 may direct histone deacetylases and histone acetyltransferases to a promoter in order to activate or repress the promoter, thus implicating histone modification in the function of YY1 antibody vendorname: Santa Cruz Biotechnology antibody vendorid: sc-281 treatment: None treatment description: No special treatment or protocol applies protocol: v042211.1 protocol description: Faster ChIP protocol & AMpure XP size selection for ChIP-seq (Myers) controlid: SL13506 labexpid: SL13273,SL14584 replicate: 1,2 softwareversion: MACS
|
Biomaterial provider |
ATCC
|
Treatment protocol |
None
|
Growth protocol |
ECC1_Myers_protocol.pdf
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina Genome Analyzer |
|
|
Data processing |
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeHaibTfbs
|
|
|
Submission date |
Sep 28, 2012 |
Last update date |
May 15, 2019 |
Contact name |
ENCODE DCC |
E-mail(s) |
encode-help@lists.stanford.edu
|
Organization name |
ENCODE DCC
|
Street address |
300 Pasteur Dr
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5120 |
Country |
USA |
|
|
Platform ID |
GPL9052 |
Series (1) |
GSE32465 |
Transcription Factor Binding Sites by ChIP-seq from ENCODE/HAIB |
|
Relations |
SRA |
SRX190209 |
BioSample |
SAMN01731638 |
Named Annotation |
GSM1010753_hg19_wgEncodeHaibTfbsEcc1Yy1sc281V0422111RawRep1.bigWig |
Named Annotation |
GSM1010753_hg19_wgEncodeHaibTfbsEcc1Yy1sc281V0422111RawRep2.bigWig |