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Sample GSM1002663 Query DataSets for GSM1002663
Status Public on Sep 12, 2012
Title Duke_Combined_GM19239_wgEncodeOpenChromSynth
Sample type SRA
 
Source name GM19239
Organism Homo sapiens
Characteristics lab: Duke
lab description: Crawford - Duke University
datatype: Combined
datatype description: Multi-assay Synthesis
cell: GM19239
cell organism: human
cell description: B-lymphocyte, lymphoblastoid, International HapMap Project, Yoruba in Ibadan, Nigera, treatment: Epstein-Barr Virus transformed
cell lineage: mesoderm
cell sex: M
treatment: None
treatment description: No special treatment or protocol applies
composite: wgEncodeOpenChromSynth
labversion: 1.0
Biomaterial provider Coriell; http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM19239
Treatment protocol None
Growth protocol GM19239_Crawford_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromSynth
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeOpenChromSynth
 
Submission date Sep 12, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9052
Series (1)
GSE40833 DNaseI/FAIRE/ChIP Synthesis from ENCODE/OpenChrom(Duke/UNC/UTA)
Relations
Reanalysis of GSM816659
Reanalysis of GSM822277
Reanalysis of GSM864358
BioSample SAMN02197271
Named Annotation GSM1002663_hg19_wgEncodeOpenChromSynthGm19239Pk.bed.gz
SRA SRX100911
SRA SRX102978
SRA SRX117802

Supplementary file Size Download File type/resource
GSM1002663_hg19_wgEncodeOpenChromSynthGm19239Pk.bed.gz 8.6 Mb (ftp)(http) BED
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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