|
| Status |
Public on Jul 17, 2017 |
| Title |
Assessment of the Pol IV largest subunit, NRPD1, DeCL domain deletion construct to rescue Pol IV-dependent DNA methylation in the nrpd1-3 mutant (Bisulfite-Seq). |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
The Arabidopsis thaliana multi-subunit RNA Polymerase IV largest subunit DeCL domain was functionally assessed with an NRPD1 DeCL domain deletion construct.
|
| |
|
| Overall design |
The Pol IV largest subunit DeCL domain deletion mutant, nrpd1 ΔDeCL, was assessed for Pol IV-dependent DNA methylation with whole genome bisulfite sequencing.
|
| |
|
| Contributor(s) |
Wendte JM, Pikaard CS |
| Citation(s) |
31329950 |
| |
| Submission date |
Mar 08, 2017 |
| Last update date |
Oct 01, 2019 |
| Contact name |
Jered Wendte |
| Organization name |
Indiana University
|
| Street address |
915 E. 3rd Street
|
| City |
Bloomington |
| State/province |
IN |
| ZIP/Postal code |
47405 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
|
| Samples (6)
|
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| This SubSeries is part of SuperSeries: |
| GSE95825 |
Functional analysis of the Pol IV DeCL domain |
|
| Relations |
| BioProject |
PRJNA378528 |
| SRA |
SRP101571 |
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