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Series GSE85171 Query DataSets for GSE85171
Status Public on Apr 01, 2018
Title Epigenetic Reprogramming of mutant RAS-driven Rhabdomyosarcoma via MEK Inhibition
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by array
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 29973406
Submission date Aug 03, 2016
Last update date May 15, 2019
Contact name Javed Khan
Phone 2407606135
Organization name NCI, NIH
Department Genetics Branch
Lab Javed Khan
Street address 37 Convent Dr.
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platforms (3)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (60)
GSM2259118 pBABE
GSM2259119 KRAS_G12D
GSM2259120 HRAS_Q61L
This SuperSeries is composed of the following SubSeries:
GSE85168 Oncogenic RAS blocks myogenic differentiation
GSE85169 MEK inhibition profoundly reprograms myogenic super enhancers in mutant-RAS driven Rhabdomyosarcoma
GSE85170 MEK inhibition rewires enhancer landscapes in RAS-driven Rhabdomyosarcoma to unlock a myogenic differentation block
BioProject PRJNA336377

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE85171_RAW.tar 38.3 Mb (http)(custom) TAR (of BED, CEL, FPKM_TRACKING)
SRA Run SelectorHelp

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