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| Status |
Public on Feb 08, 2021 |
| Title |
SATB2 induces transcriptional programs in melanoma that lead to metastatic behavior [RNA-Seq] |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report gene expression data for zebrafish melanomas overexpressing human SATB2 and EGFP.
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| |
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| Overall design |
RNA-seq was performed on three biological replicates of primary zebrafish melanoma tumors that were excized from MCR:EGFP (control) and MCR:SATB2 overexpressing Tg(BRAF V600E);p53-/-; mitf-/- zebrafish.
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| |
|
| Contributor(s) |
van Rooijen E, Yang S, Zhou Y, Zon LI |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Feb 15, 2016 |
| Last update date |
Feb 08, 2021 |
| Contact name |
Leonard Zon |
| E-mail(s) |
zon@enders.tch.harvard.edu
|
| Organization name |
Boston Children's Hospital
|
| Department |
Oncology/Hematology
|
| Street address |
1 Blackfan Circle
|
| City |
Boston |
| State/province |
MA |
| ZIP/Postal code |
02115 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL18413 |
Illumina HiSeq 2500 (Danio rerio) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
| GSE77923 |
SATB2 induces transcriptional programs in melanoma that lead to metastatic behavior |
|
| Relations |
| BioProject |
PRJNA312107 |
| SRA |
SRP070127 |
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