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Series GSE77029 Query DataSets for GSE77029
Status Public on Apr 04, 2016
Title Distinct myeloid progenitor differentiation pathways uncovered through single cell RNA sequencing
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Haematopoietic stem cells can differentiate into all blood cell types. In this process, cells become progressively restricted to a single cell type. The order in which differentiating cells loose lineage potential, and the prospective isolation of cells with a defined potential remains a long-standing question. We performed gene expression analysis of haematopoietic cells from Gata1-EGFP reporter mice, leading to a model for hematopoiesis where the initial lineage decision consists of a seperation of erythroid/megakaryocyte/mast cell/eosinophil potential from lymphopoietic/monocyte/neutrophil potential
 
Overall design Find unbiased heterogeneity in the preGM hematopoietic progenitor population
 
Contributor(s) Drissen R, Giustacchini A, Thongjuea S, Nerlov C, Jacobsen SE
Citation(s) 27043410
Submission date Jan 20, 2016
Last update date May 15, 2019
Contact name Claus Nerlov
E-mail(s) claus.nerlov@imm.ox.ac.uk
Organization name Weatheral Institute of Molecular Medicine
Department MRC Molecular Haematology Unit
Lab Nerlov Laboratory
Street address John Radcliffe Hospital, University of Oxford
City Oxford
ZIP/Postal code OX3 9DS
Country United Kingdom
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (64)
GSM2042734 Sample76 Wild type preGM
GSM2042735 Sample77 Wild type preGM
GSM2042736 Sample78 Wild type preGM
Relations
BioProject PRJNA309316
SRA SRP068673

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77029_Drissen_et.al_RefSeq_FPKM.txt.gz 1.5 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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