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| Status |
Public on Mar 17, 2016 |
| Title |
Dicer-independent RNA-directed DNA methylation in Arabidopsis [small RNA-seq 1] |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
Using small RNA-Seq(sRNA-Seq) to get small RNA profiling of dcl2/3/4, dcl1/2/3/4 and WT
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| Overall design |
3 samples examined, WT, dcl2/3/4 and dcl1/2/3/4
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| Contributor(s) |
Yang D, Tang K, Zhu J |
| Citation(s) |
26642813 |
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| Submission date |
Jul 14, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Jian-Kang Zhu |
| E-mail(s) |
zhu132@purdue.edu
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| Organization name |
Purdue University
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| Department |
Department of Horticulture and Landscape Architecture
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| Street address |
625 Agriculture Mall Dr.
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| City |
West Lafayette |
| State/province |
IN |
| ZIP/Postal code |
47907 |
| Country |
USA |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA289906 |
| SRA |
SRP061168 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE70913_RAW.tar |
8.7 Mb |
(http)(custom) |
TAR (of BEDGRAPH) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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