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| Status |
Public on Aug 21, 2017 |
| Title |
Identification of ARR1 targets in the root of Arabidopsis thaliana |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by genome tiling array
|
| Summary |
We performed a chromatin immunoprecipitation-based microarray experiment (ChIP chip) in order to identify ARR1 direct target genes
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| Overall design |
ARR1 ChIP was performed with a GFP antibody for two independent biological replicates for each genotype (pARR1::ARR1:GFP (ARR1) and Col-wt (control)). On each array ARR1 and control samples were hybridized in different colors. Moreover, a dye swap was perfomed. In total this resulted in 4 arrays (2 biological samples in 2 dye-swapped hybridizations).
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| Contributor(s) |
Busch W, Sozzani R, Di Mambro R |
| Citation(s) |
28831001 |
| |
| Submission date |
Jul 07, 2015 |
| Last update date |
Nov 21, 2017 |
| Contact name |
Wolfgang Busch |
| E-mail(s) |
wbusch@salk.edu
|
| Phone |
8584534100
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| Organization name |
Salk Institute for Biological Studies
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| Lab |
PBIO-B
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| Street address |
Salk institute, 10010 n torrey pines rd
|
| City |
la jolla |
| State/province |
CALIFORNIA |
| ZIP/Postal code |
92037 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL10326 |
Agilent-015210 Benfey/Cui Arabidopsis custom whole genome promoter array 244k v1.0 |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA289126 |
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