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Series GSE68510 Query DataSets for GSE68510
Status Public on Oct 23, 2017
Title The maize pericarp color1 gene is regulated by RdDM and non-RdDM types of chromatin silencing
Organism Zea mays
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This study compared the molecular basis underlying the differential regulation of p1 alleles/epialleles by mop1 to understand molecular mechanism maintaining the tissue specific silencing.
 
Overall design Genome-wide small RNA profiling was done by Illumina TruSeq sample preparation followed by high-throughput sequencing with Illumina HiSeq 2000 platform.
 
Contributor(s) Meyers BC, Chopra S, Lee T
Citation(s) 29112965
Submission date May 04, 2015
Last update date Jul 25, 2021
Contact name Blake C. Meyers
E-mail(s) bmeyers@danforthcenter.org
Phone 314-587-1422
Organization name Donald Danforth Plant Science Center
Lab Meyers lab
Street address 975 N Warson Road
City St. Louis
State/province MO
ZIP/Postal code 63132
Country USA
 
Platforms (1)
GPL15463 Illumina HiSeq 2000 (Zea mays)
Samples (5)
GSM1674072 wtMm153ye
GSM1674073 wtMm155ye
GSM1674074 wtMm156ye
Relations
BioProject PRJNA282953
SRA SRP057985

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68510_RAW.tar 279.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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