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Series GSE66579 Query DataSets for GSE66579
Status Public on Apr 22, 2015
Title Topologically-associating domains and their long-range contacts are established during early G1 coincident with the establishment of the replication timing program
Organism Mus musculus
Experiment type Other
Summary This study uncovers a temporal hierarchy of chromatin re-organization during G1 that is linked to the developmental and temporal control of replication timing, revealing a novel link between development and genome organization.
Overall design Analysis of time-course 4C-seq for several baits to study dynamic changes in chromatin organization during early G1
Contributor(s) Dileep V, Ay F, Sima J, Noble WS, Gilbert DM
Citation(s) 25995270
Submission date Mar 05, 2015
Last update date May 15, 2019
Contact name David M. Gilbert
Phone 8506457583
Organization name Florida State University
Street address 319 Stadium Drive
City Tallahassee
State/province Florida
ZIP/Postal code 32306-4295
Country USA
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (109)
GSM1625713 Ch8.B7-G0-bio-replicate2
GSM1625714 Ch8.B7-G0-bio-replicate1
GSM1625715 Ch8.B7-G2-bio-replicate1
BioProject PRJNA277358
SRA SRP055879

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE66579_rawContactCounts.txt.gz 13.7 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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