|
| Status |
Public on Oct 01, 2015 |
| Title |
sRNA profiling between the 7B-1 male-sterile tomato and its wild type in response to abiotic stress |
| Organism |
Solanum lycopersicum |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
The RNA-seq was used to identify differentially expressed miRNAs between a male sterile and wild type tomato seedlings in response to abiotic stress
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| Overall design |
Two small RNA libraries were constructed from male-sterile and wild type tomato flower buds using the TruSeq Small RNA Sample Preparation Kit from Illumina, and were sequenced on the Illumina Hiseq2000
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| Contributor(s) |
Omidvar V, Mohorianu I, Dalmay T, Fellner M |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Feb 17, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Irina Mohorianu |
| E-mail(s) |
irina.mohorianu@paediatrics.ox.ac.uk
|
| Organization name |
University of Oxford
|
| Department |
Medical Sciences Division
|
| Lab |
Oxford Vaccine Group
|
| Street address |
Headington
|
| City |
Oxford |
| ZIP/Postal code |
OX3 7LE |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL16345 |
Illumina HiSeq 2000 (Solanum lycopersicum) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA275584 |
| SRA |
SRP055077 |
