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Series GSE64499 Query DataSets for GSE64499
Status Public on Feb 05, 2015
Title MethlyC-Seq of nrpd1-3, nrpd1-12, and nrpe1-11
Organism Arabidopsis thaliana
Experiment type Methylation profiling by high throughput sequencing
Summary Using MethylC-Seq to provide single-base resolution of DNA methylation status in nrpd1-3, nrpd1-12, and nrpe1-11 mutants
 
Overall design MethylC-Seq: 3 mutants examined, nrpd1-3, nrpd1-12, and nrpe1-11
 
Contributor(s) Lei M, Tang K, Zhu J
Citation(s) 25733903
Submission date Dec 24, 2014
Last update date May 15, 2019
Contact name Jian-Kang Zhu
E-mail(s) zhu132@purdue.edu
Organization name Purdue University
Department Department of Horticulture and Landscape Architecture
Street address 625 Agriculture Mall Dr.
City West Lafayette
State/province IN
ZIP/Postal code 47907
Country USA
 
Platforms (1)
GPL13222 Illumina HiSeq 2000 (Arabidopsis thaliana)
Samples (3)
GSM1572727 nrpd1-12_MethylC-Seq
GSM1572728 nrpd1-3_MethylC-Seq
GSM1572729 nrpe1-11_MethylC-Seq
Relations
BioProject PRJNA271134
SRA SRP051532

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE64499_RAW.tar 249.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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