|
| Status |
Public on Feb 26, 2015 |
| Title |
CTCF functions as a chromatin insulator in the HoxA cluster during neurogenesis [RNA-Seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this experiment, we sought to analyze how the transcriptome of WT, Δ5|6, and Δ5|6:7|9 cells vary during differentiation of ESCs into cervical motor neurons
|
| |
|
| Overall design |
3 lines (WT, Δ5|6, Δ5|6:7|9)
|
| |
|
| Contributor(s) |
Narendra V, An D, Mazzoni E, Reinberg D |
| Citation(s) |
25722416 |
| |
| Submission date |
Aug 08, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Danny Reinberg |
| E-mail(s) |
reinbd01@nyumc.org
|
| Phone |
212-263-9036
|
| Organization name |
NYU School of Medicine / HHMI
|
| Street address |
522 First Avenue, 2nd floor Rm 211
|
| City |
New York City |
| State/province |
New York |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (12)
|
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| This SubSeries is part of SuperSeries: |
| GSE60240 |
CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation |
|
| Relations |
| BioProject |
PRJNA257793 |
| SRA |
SRP045359 |
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