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Series GSE60240 Query DataSets for GSE60240
Status Public on Feb 26, 2015
Title CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 25722416
Submission date Aug 08, 2014
Last update date May 15, 2019
Contact name Danny Reinberg
E-mail(s) reinbd01@nyumc.org
Phone 212-263-9036
Organization name NYU School of Medicine / HHMI
Street address 522 First Avenue, 2nd floor Rm 211
City New York City
State/province New York
ZIP/Postal code 10016
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (38)
GSM1468330 ESC.WT.b1 [RNA-Seq]
GSM1468331 ESC.Δ5|6.b1 [RNA-Seq]
GSM1468332 Day0.WT.b1 [RNA-Seq]
This SuperSeries is composed of the following SubSeries:
GSE60226 CTCF functions as a chromatin insulator in the HoxA cluster during neurogenesis [RNA-Seq]
GSE60227 CTCF functions as a chromatin insulator in the HoxA cluster during neurogenesis [4C-Seq]
GSE60232 CTCF functions as a chromatin insulator in the HoxA cluster during neurogenesis [ChIP-Seq]
Relations
BioProject PRJNA257809

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE60240_RAW.tar 3.8 Gb (http)(custom) TAR (of BW, TXT, XLSX)
SRA Run SelectorHelp

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