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| Status |
Public on Sep 11, 2014 |
| Title |
Global hepatic transcript data from fasted male BXD strains on chow or high fat diet |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
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| Summary |
Transcript data from livers from fasted-state BXD strains on chow or high fat diet
We used microarrays to compare the hepatic expression differences across the BXD strain family and across two diverse diets
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| Overall design |
29-week-old male mice were fasted overnight (6pm-9am), anesthetized under isoflurane, and perfused, then livers were snap-frozen in liquid nitrogen for RNA extraction and RNEasy cleanup. Each dietary and strain cohort consisted of ~5 animals which were prepared independently then pooled evenly by µg RNA before the Affymetrix arrays were run.
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| Contributor(s) |
Auwerx J, Williams EG |
| Citation(s) |
25215496, 27284200, 29945935, 26404765, 34561431 |
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| Submission date |
Aug 06, 2014 |
| Last update date |
Oct 27, 2021 |
| Contact name |
Johan Auwerx |
| E-mail(s) |
admin.auwerx@epfl.ch
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| Phone |
+41 216939522
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| Organization name |
École Polytechnique Fédérale de Lausanne
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| Department |
SV IBI NCEM
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| Lab |
Integrative and Systems Physiology
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| Street address |
Station 15
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| City |
Lausanne |
| ZIP/Postal code |
1015 |
| Country |
Switzerland |
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| Platforms (1) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (81)
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| GSM1466465 |
BXD44 Liver, High Fat Diet |
| GSM1466466 |
BXD45 Liver, Chow Diet |
| GSM1466467 |
BXD45 Liver, High Fat Diet |
| GSM1466468 |
BXD48 Liver, Chow Diet |
| GSM1466469 |
BXD48 Liver, High Fat Diet |
| GSM1466470 |
BXD49 Liver, Chow Diet |
| GSM1466471 |
BXD49 Liver, High Fat Diet |
| GSM1466472 |
BXD50 Liver, High Fat Diet |
| GSM1466473 |
BXD51 Liver, Chow Diet |
| GSM1466474 |
BXD51 Liver, High Fat Diet |
| GSM1466475 |
BXD55 Liver, Chow Diet |
| GSM1466476 |
BXD55 Liver, High Fat Diet |
| GSM1466477 |
BXD56 Liver, Chow Diet |
| GSM1466478 |
BXD56 Liver, High Fat Diet |
| GSM1466479 |
BXD60 Liver, Chow Diet |
| GSM1466480 |
BXD61 Liver, Chow Diet |
| GSM1466481 |
BXD61 Liver, High Fat Diet |
| GSM1466482 |
BXD62 Liver, Chow Diet |
| GSM1466483 |
BXD62 Liver, High Fat Diet |
| GSM1466484 |
BXD63 Liver, Chow Diet |
| GSM1466485 |
BXD63 Liver, High Fat Diet |
| GSM1466486 |
BXD64 Liver, Chow Diet |
| GSM1466487 |
BXD64 Liver, High Fat Diet |
| GSM1466488 |
BXD65 Liver, Chow Diet |
| GSM1466489 |
BXD65 Liver, High Fat Diet |
| GSM1466490 |
BXD66 Liver, Chow Diet |
| GSM1466491 |
BXD66 Liver, High Fat Diet |
| GSM1466492 |
BXD68 Liver, Chow Diet |
| GSM1466493 |
BXD68 Liver, High Fat Diet |
| GSM1466494 |
BXD69 Liver, Chow Diet |
| GSM1466495 |
BXD69 Liver, High Fat Diet |
| GSM1466496 |
BXD70 Liver, Chow Diet |
| GSM1466497 |
BXD70 Liver, High Fat Diet |
| GSM1466498 |
BXD71 Liver, Chow Diet |
| GSM1466499 |
BXD71 Liver, High Fat Diet |
| GSM1466500 |
BXD73 Liver, Chow Diet |
| GSM1466501 |
BXD73 Liver, High Fat Diet |
| GSM1466502 |
BXD75 Liver, Chow Diet |
| GSM1466503 |
BXD75 Liver, High Fat Diet |
| GSM1466504 |
BXD79 Liver, Chow Diet |
| GSM1466505 |
BXD79 Liver, High Fat Diet |
| GSM1466506 |
BXD80 Liver, Chow Diet |
| GSM1466507 |
BXD80 Liver, High Fat Diet |
| GSM1466508 |
BXD81 Liver, Chow Diet |
| GSM1466509 |
BXD81 Liver, High Fat Diet |
| GSM1466510 |
BXD83 Liver, Chow Diet |
| GSM1466511 |
BXD83 Liver, High Fat Diet |
| GSM1466512 |
BXD84 Liver, Chow Diet |
| GSM1466513 |
BXD84 Liver, High Fat Diet |
| GSM1466514 |
BXD85 Liver, Chow Diet |
| GSM1466515 |
BXD85 Liver, High Fat Diet |
| GSM1466516 |
BXD87 Liver, Chow Diet |
| GSM1466517 |
BXD87 Liver, High Fat Diet |
| GSM1466518 |
BXD89 Liver, Chow Diet |
| GSM1466519 |
BXD89 Liver, High Fat Diet |
| GSM1466520 |
BXD90 Liver, Chow Diet |
| GSM1466521 |
BXD90 Liver, High Fat Diet |
| GSM1466522 |
BXD92a Liver, Chow Diet |
| GSM1466523 |
BXD95 Liver, Chow Diet |
| GSM1466524 |
BXD95 Liver, High Fat Diet |
| GSM1466525 |
BXD96 Liver, Chow Diet |
| GSM1466526 |
BXD96 Liver, High Fat Diet |
| GSM1466527 |
BXD97 Liver, Chow Diet |
| GSM1466528 |
BXD97 Liver, High Fat Diet |
| GSM1466529 |
BXD98 Liver, Chow Diet |
| GSM1466530 |
BXD98 Liver, High Fat Diet |
| GSM1466531 |
BXD99 Liver, Chow Diet |
| GSM1466532 |
BXD99 Liver, High Fat Diet |
| GSM1466533 |
BXD100 Liver, Chow Diet |
| GSM1466534 |
BXD100 Liver, High Fat Diet |
| GSM1466535 |
BXD101 Liver, Chow Diet |
| GSM1466536 |
BXD101 Liver, High Fat Diet |
| GSM1466537 |
BXD103 Liver, Chow Diet |
| GSM1466538 |
BXD103 Liver, High Fat Diet |
| GSM1466539 |
C57BL/6J Liver, Chow Diet |
| GSM1466540 |
C57BL/6J Liver, High Fat Diet |
| GSM1466541 |
DBA/2J Liver, Chow Diet |
| GSM1466542 |
DBA/2J Liver, High Fat Diet |
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| Relations |
| BioProject |
PRJNA257635 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE60149_BXD_Liver_MatrixTable.txt.gz |
6.8 Mb |
(ftp)(http) |
TXT |
| GSE60149_RAW.tar |
288.1 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
| Processed data are available on Series record |
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