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Series GSE5793 Query DataSets for GSE5793
Status Public on Feb 08, 2007
Title C. elegans gene expression in response to the pathogenic P. aeruginosa strain PA14.
Organism Caenorhabditis elegans
Experiment type Expression profiling by array
Summary Analysis of differential gene expression in C. elegans adults exposed to three different bacteria: E. coli strain OP50, wild-type P. aeruginosa PA14 and gacA mutant PA14. Samples were analyzed at 4 hours and 8 hours after exposure to the different bacteria. These studies identified C. elegans genes induced by pathogen infection.
Keywords: Time course, response to pathogen infection
 
Overall design Three independent biological replicates were isolated for each treatment. All treatments were performed in parallel.
 
Contributor(s) Troemel ER, Kim DH, Ausubel FM
Citation(s) 17096597
Submission date Sep 07, 2006
Last update date Jul 06, 2016
Contact name Emily Troemel
E-mail(s) etroemel@ucsd.edu
Organization name University of California, San Diego
Department Cell and Developmental Biology
Lab Troemel
Street address 9500 Gilman Dr, #0349
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
 
Platforms (1)
GPL200 [Celegans] Affymetrix C. elegans Genome Array
Samples (18)
GSM135322 Celegans_OP50_4hours_RepA
GSM135323 Celegans_OP50_4hours_RepB
GSM135324 Celegans_OP50_4hours_RepC
Relations
BioProject PRJNA97155

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE5793_RAW.tar 62.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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