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Series GSE57377 Query DataSets for GSE57377
Status Public on May 08, 2014
Title mRNA-seq analysis of superficial zone (SFZ) and deeper layers (deep AC) of articular cartilage of adult rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary We compared gene expression profiles of SFZ and deep AC of articular cartilage through laser microdissection (LMD) using adhesive tape, linear amplification of mRNA, and mRNA-seq analysis.
Overall design gene expression profiles of SFZ and deep AC obtained from the proximal tibia of two adult rats
Contributor(s) Mori Y, Saito T
Citation(s) 25152035
Submission date May 07, 2014
Last update date May 15, 2019
Contact name Yoshifumi Mori
Organization name Tokyo University
Department Orthopaedic Surgery
Street address 7-3-1, Hongo
City Bunkyo-ku, Tokyo
ZIP/Postal code 113-8655
Country Japan
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (4)
GSM1381439 rat1_SFZ
GSM1381440 rat1_DeepAC
GSM1381441 rat2_SFZ
BioProject PRJNA246364
SRA SRP041741

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Supplementary file Size Download File type/resource
GSE57377_TMM.xlsx.gz 4.8 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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