|
| Status |
Public on Dec 31, 2021 |
| Title |
Transcriptome (Affymetrix arrays) and Methylome of HepG2 cells uninfected (Cont) or infected with the pathogen Listeria monocytogenes (Inf) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Methylation profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
Note that transcriptomes are performed with Affymetrix arrays and samples noted "S72h" have been sorted by FACS.
|
| |
|
| Overall design |
Refer to individual Series.
|
| |
|
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Dec 16, 2013 |
| Last update date |
Dec 31, 2021 |
| Contact name |
Helene Bierne |
| E-mail(s) |
helene.bierne@inrae.fr
|
| Phone |
33134652289
|
| Organization name |
INRAE - University PARIS SACLAY
|
| Department |
Micalis Institute
|
| Lab |
Epigenetics and Cellular Microbiology
|
| Street address |
Domaine de Vilvert, bat 442, INRA Micalis
|
| City |
Jouy-en-Josas |
| ZIP/Postal code |
78350 |
| Country |
France |
| |
|
| Platforms (2) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
|
| Samples (19)
|
|
| This SuperSeries is composed of the following SubSeries: |
| GSE53285 |
Transcriptome (Affymetrix arrays) of HepG2 cells uninfected (Cont) or infected with the pathogen Listeria monocytogenes (Inf) for 24 or 72 hours. |
| GSE53293 |
Methylome of of HepG2 cells uninfected ("Cont") or infected with the pathogen Listeria monocytogenes ("Inf") by Methyl-binding domain-sequencing (MBD-Seq/MethylCap-Seq) |
|
| Relations |
| BioProject |
PRJNA231847 |
Less...
More...