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| Status |
Public on Feb 11, 2015 |
| Title |
Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction |
| Organisms |
Zea mays; Zea mays subsp. mays |
| Experiment type |
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
25713378 |
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| Submission date |
Nov 12, 2013 |
| Last update date |
Apr 28, 2020 |
| Contact name |
Blake C. Meyers |
| E-mail(s) |
bmeyers@danforthcenter.org
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| Phone |
314-587-1422
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| Organization name |
Donald Danforth Plant Science Center
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| Lab |
Meyers lab
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| Street address |
975 N Warson Road
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| City |
St. Louis |
| State/province |
MO |
| ZIP/Postal code |
63132 |
| Country |
USA |
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| Platforms (2) |
| GPL15463 |
Illumina HiSeq 2000 (Zea mays) |
| GPL17914 |
Illumina HiSeq 2000 (Zea mays subsp. mays) |
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| Samples (100)
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| GSM1262521 |
ocl4, 0.7mm Anther |
| GSM1262522 |
mac1, 0.4mm Anther |
| GSM1262523 |
mac1, 0.7mm Anther |
| GSM1262524 |
0.2mm Anther, rep1 |
| GSM1262525 |
0.4mm Anther, rep1 |
| GSM1262526 |
0.7mm Anther, rep1 |
| GSM1262527 |
1.0mm Anther, rep1 |
| GSM1262528 |
1.5mm Anther, rep1 |
| GSM1262529 |
2.0mm Anther, rep1 |
| GSM1262530 |
2.5mm Anther, rep1 |
| GSM1262531 |
3.0mm Anther, rep1 |
| GSM1262532 |
4.0mm Anther, rep1 |
| GSM1262533 |
5.0mm Anther, rep1 |
| GSM1262534 |
Mature Pollen, rep1 |
| GSM1262535 |
0.2mm Anther, rep2 |
| GSM1262536 |
0.4mm Anther, rep2 |
| GSM1262537 |
0.7mm Anther, rep2 |
| GSM1262538 |
1.0mm Anther, rep2 |
| GSM1262539 |
1.5mm Anther, rep2 |
| GSM1262540 |
2.0mm Anther, rep2 |
| GSM1262541 |
2.5mm Anther, rep2 |
| GSM1262542 |
3.0mm Anther, rep2 |
| GSM1262543 |
4.0mm Anther, rep2 |
| GSM1262544 |
5.0mm Anther, rep2 |
| GSM1262545 |
Mature Pollen, rep2 |
| GSM1262546 |
0.4mm Anther, rep3 |
| GSM1262547 |
0.7mm Anther, rep3 |
| GSM1262548 |
1.0mm Anther, rep3 |
| GSM1262549 |
1.5mm Anther, rep3 |
| GSM1262550 |
2.0mm Anther, rep3 |
| GSM1262551 |
2.5mm Anther, rep3 |
| GSM1262552 |
3.0mm Anther, rep3 |
| GSM1262553 |
4.0mm Anther, rep3 |
| GSM1262554 |
5.0mm Anther, rep3 |
| GSM1262555 |
Mature Pollen, rep3 |
| GSM1262556 |
msca1, 0.4mm Anther, rep1 |
| GSM1262557 |
msca1, 0.7mm Anther, rep1 |
| GSM1262558 |
msca1, 1.0mm Anther, rep1 |
| GSM1262559 |
msca1, 1.5mm Anther, rep1 |
| GSM1262560 |
msca1, 2.0mm Anther, rep1 |
| GSM1262561 |
msca1, 0.4mm Anther, rep2 |
| GSM1262562 |
msca1, 0.7mm Anther, rep2 |
| GSM1262563 |
msca1, 1.0mm Anther, rep2 |
| GSM1262564 |
msca1, 1.5mm Anther, rep2 |
| GSM1262565 |
msca1, 2.0mm Anther, rep2 |
| GSM1262566 |
mac1, 0.4mm Anther, rep1 |
| GSM1262567 |
mac1, 0.7mm Anther, rep1 |
| GSM1262568 |
mac1, 1.0mm Anther, rep1 |
| GSM1262569 |
mac1, 1.5mm Anther, rep1 |
| GSM1262570 |
mac1, 2.0mm Anther, rep1 |
| GSM1262571 |
mac1, 0.4mm Anther, rep2 |
| GSM1262572 |
mac1, 0.7mm Anther, rep2 |
| GSM1262573 |
mac1, 1.0mm Anther, rep2 |
| GSM1262574 |
mac1, 1.5mm Anther, rep2 |
| GSM1262575 |
mac1, 2.0mm Anther, rep2 |
| GSM1262576 |
ocl4, 0.4mm Anther, rep1 |
| GSM1262577 |
ocl4, 0.7mm Anther, rep1 |
| GSM1262578 |
ocl4, 1.0mm Anther, rep1 |
| GSM1262579 |
ocl4, 1.5mm Anther, rep1 |
| GSM1262580 |
ocl4, 2.0mm Anther, rep1 |
| GSM1262581 |
ocl4, 0.4mm Anther, rep2 |
| GSM1262582 |
ocl4, 0.7mm Anther, rep2 |
| GSM1262583 |
ocl4, 1.0mm Anther, rep2 |
| GSM1262584 |
ocl4, 1.5mm Anther, rep2 |
| GSM1262585 |
ocl4, 2.0mm Anther, rep2 |
| GSM1262608 |
PARE library from Maize B73, pollen |
| GSM1262609 |
PARE library from Maize mop1 mutant, pollen |
| GSM1262610 |
PARE library from Anther 1.0 and 1.5 mm |
| GSM1262611 |
PARE library from Anther 2.0mm, 2.5mm and 3.0mm |
| GSM1262612 |
PARE library from Anther 4.0mm and pollen |
| GSM1262809 |
B73, Mature Pollen 2 |
| GSM1262810 |
mop1, Mature Pollen 2 |
| GSM3752432 |
ameiotic1 (489) maize anthers, male sterile, 0.4 mm rep 1. |
| GSM3752433 |
ameiotic1 (489) maize anthers, male sterile, 0.7 mm rep 1 |
| GSM3752434 |
ameiotic1 (489) maize anthers, male sterile, 1.0 mm rep 1. |
| GSM3752435 |
ameiotic1 (489) maize anthers, male sterile, 1.5 mm rep 1 |
| GSM3752436 |
ameiotic1 (489) maize anthers, male sterile, 1.5 mm rep 2 |
| GSM3752437 |
ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 1. |
| GSM3752438 |
ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 2. |
| GSM3752439 |
ameiotic1 (praI) maize anthers, male sterile, 1.0 mm rep 3. |
| GSM3752440 |
ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 1 |
| GSM3752441 |
ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 2. |
| GSM3752442 |
ameiotic1 (praI) maize anthers, male sterile, 1.5 mm rep 3. |
| GSM3752443 |
Fertile sib (of am1-489), maize anthers, 1.5 mm rep 1. |
| GSM3752444 |
Fertile sib (of am1-489), maize anthers, 1.5 mm rep 2. |
| GSM3752445 |
Fertile sib (of am1-489), maize anthers, 1.5 mm rep 3. |
| GSM3752446 |
ameiotic1 (praI) maize anthers 1.25 mm, rep 1 |
| GSM3752447 |
ameiotic1 (praI) maize anthers 1.25 mm, rep 2 |
| GSM3752448 |
ameiotic1 (praI) maize anthers 1.25 mm, rep 3 |
| GSM3752449 |
Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 1 |
| GSM3752450 |
Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 2 |
| GSM3752451 |
Fertile sib (of am1-praI), maize anthers 1.25 mm, rep 3 |
| GSM3752452 |
am1-489 maize anthers 1.25 mm, rep 1 |
| GSM3752453 |
am1-489 maize anthers 1.25 mm, rep 2 |
| GSM3752454 |
Fertile sib (of am1-489), maize anthers 1.25 mm, rep 1 |
| GSM3752455 |
Fertile sib (of am1-489), maize anthers 1.25 mm, rep 2 |
| GSM3752456 |
Fertile sib (of am1-489), maize anthers 1.25 mm, rep 3 |
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| This SuperSeries is composed of the following SubSeries: |
| GSE52290 |
Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction (RNA-seq) |
| GSE52293 |
Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction (small RNA-seq) |
| GSE52297 |
Spatiotemporal and cell-type dependent phasiRNA biogenesis in maize male reproduction (PARE) |
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| Relations |
| BioProject |
PRJNA227381 |
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