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Series GSE47195 Query DataSets for GSE47195
Status Public on Sep 17, 2013
Title SALT-RESPONSIVE ERF1 expression profiling in rice roots
Organism Oryza sativa
Experiment type Expression profiling by array
Summary To identify genes that are regulated by SERF1, we performed expression profiling on roots of serf1 and wild-type plants under standard growth conditions.
 
Overall design Plants were grown for 4 weeks at (day/night) 26/22°C, 75/70% relative humidity with a day-length of 12 h and a light intensity of 700 µmol m-2 s-1. Seeds of serf1 T-DNA lines and Nipponbare wild type were placed on hydroponic boxes with full-strength Yoshida medium (Yoshida et al., 1971) using styrofoam adaptors. For each genotype 3 biological replicates were seperately isolated and measured.
 
Contributor(s) Schmidt R, Schippers JH, Mueller-Roeber B
Citation(s) 24046061
Submission date May 22, 2013
Last update date Dec 27, 2017
Contact name Jos Schippers
E-mail(s) schippers@mpimp-golm.mpg.de
Organization name MPIMP-golm
Department Plant Signaling
Street address Am Muehlenberg 1
City Potsdam
ZIP/Postal code 14476
Country Germany
 
Platforms (1)
GPL2025 [Rice] Affymetrix Rice Genome Array
Samples (6)
GSM1146531 Root_wildtype_rep1
GSM1146532 Root_wildtype_rep2
GSM1146533 Root_wildtype_rep3
Relations
BioProject PRJNA205061

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47195_RAW.tar 135.6 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file

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