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Series GSE38512 Query DataSets for GSE38512
Status Public on Jun 06, 2012
Title Placental gene expression in pregnancies established after the transfer of day 7 blastocysts derived from in vitro (IVP), somatic cell nuclear transfer (SCNT) and in vivo (AI) embryos
Organism Bos taurus
Experiment type Expression profiling by array
Summary Aberrant placental gene expression associated with culture condition and/or deficiencies in transcriptome reprogramming are hypothesized to be the major cause of SCNT and IVP inefficiencies. Therefore, the main objective of this study was to invesitgate the dysregulated genes, molecular pathways and functional alteration in bovine placentas derived from SCNT and IVP pregnancies compared to their AI counterparts
 
Overall design Day 7 blastocysts derived from AI, IVP or SCNT were transferred to synchronized cows. The pregnant animals were slaughtered at day 50 of the gestation period and the placentas were then recovered and used for transcriptome analysis using GeneChip bovine genome array
 
Contributor(s) Salilew-Wondim D, Tesfaye D, Hossain MM, Held E, Rings F, Tholen E, Looft C, Schellander K, Hoelker M
Citation(s) 23092953
Submission date Jun 05, 2012
Last update date Feb 05, 2013
Contact name Dessie Salilew-Wondim
E-mail(s) dsalilew@uni-bonn.de
Organization name University of Bonn
Department Animal breeding and husbandry group
Street address Endenicher Allee 15
City Bonn
State/province NRW
ZIP/Postal code D-53115
Country Germany
 
Platforms (1)
GPL2112 [Bovine] Affymetrix Bovine Genome Array
Samples (12)
GSM943897 IVP placenta replication1
GSM943898 IVP placenta replication2
GSM943899 IVP placenta replication3
Relations
BioProject PRJNA168092

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38512_RAW.tar 18.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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