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| Status |
Public on Oct 09, 2012 |
| Title |
Divergent Patterns of Endogenous Small RNA Populations From Seed and Vegetative Tissues of Glycine max |
| Organism |
Glycine max |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
An overview of small RNAs sequences existing in seed development and contrasted with vegetative tissues of the soybean
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| Overall design |
Four small RNA sequence populations from high throughput deep sequencing-by-synthesis and representing different tissues/organs of the soybean were characterized into small RNA classes, level of expresion, genes of origin and putative targeted genes
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| Contributor(s) |
Zabala G, Campos E, Varala KK, Bloomfield S, Jones SI, Win H, Tuteja JH, Calla B, Clough SJ, Hudson M, Vodkin LO |
| Citation(s) |
23031057 |
| Submission date |
Mar 22, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Lila O. Vodkin |
| E-mail(s) |
l-vodkin@illinois.edu
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| Phone |
217-244-6147
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| Organization name |
University of Illinois
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| Department |
Crop Sciences
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| Lab |
Lila Vodkin
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| Street address |
1201 W. Gregory Dr.
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| City |
Urbana |
| State/province |
IL |
| ZIP/Postal code |
61801 |
| Country |
USA |
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| Platforms (1) |
| GPL10267 |
Illumina Genome Analyzer (Glycine max) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA153803 |
| SRA |
SRP011915 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE36728_RAW.tar |
2.9 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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