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Series GSE34943 Query DataSets for GSE34943
Status Public on Jul 04, 2012
Title Transcriptome analysis of immediate early events in mRNA-mediated cellular reprogramming of human foreskin fibroblasts
Organism Homo sapiens
Experiment type Expression profiling by array
Summary In this study human neonatal foreskin fibroblasts (HFF1 and BJ) were lipofected with an equal mixture of human reprogramming factor-encoding mRNAs. The cells were lysed and total RNA was harvested 24 hours post-transfection. Gene regulation was evaluated with respect to corresponding mock-transfected, Lipofectamine-treated control fibroblasts. For comparison, wildtype (un-treated) HFF1 and BJ fibroblasts as well as undifferentiated HFF1- and BJ-derived induced pluripotent stem cells and human embryonic stem cells (generated and maintained in our laboratory (refer to GSE26575) were included in the analysis.
 
Overall design Total RNA obtained from untreated human neonatal foreskin fibroblasts, reprogramming factor- and mock(Lipofectamine-treated)-transfected human neonatal fibroblasts, undifferentiated hESCs and iPSCs (derived from human neonatal foreskin fibroblasts).
 
Contributor(s) Adjaye J, Drews K
Citation(s) 22381475
Submission date Jan 09, 2012
Last update date Mar 20, 2017
Contact name Katharina Drews
Organization name Max Planck Institute for Molecular Genetics
Department Vertebrate Genomics
Lab Molecular Embryology and Aging Group
Street address Ihnestr. 63-73
City Berlin
ZIP/Postal code 14195
Country Germany
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (22)
GSM858138 HFF1-a
GSM858139 HFF1-b
GSM858140 BJ-a
Relations
BioProject PRJNA150973

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34943_RAW.tar 3.9 Mb (http)(custom) TAR
GSE34943_non-normalized.txt.gz 3.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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