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Status |
Public on Dec 02, 2011 |
Title |
Expression data from C. elegans |
Organism |
Caenorhabditis elegans |
Experiment type |
Expression profiling by array
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Summary |
We exposed wild-type Vibrio cholerae E7496, multiple Vibrio cholerae virulence factor deleted genes with intact hemolysin A gene [CVD109] and without hemolysin A gene [CVD110] in E7946, and E.coli OP50 to wild-type C.elegans N2 for 18 hours. We used microarrays to detail the global gene expression and identified distinct classes of up-regulated and down-regulated genes during this process.
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Overall design |
C. elegans were exposed to Vibrio cholerae and E.coli then hybridization on Affymetrix microarray chips.
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Contributor(s) |
Sahu SN, Patel I, Cinar HN |
Citation(s) |
22675448 |
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Submission date |
Nov 29, 2011 |
Last update date |
Jul 06, 2016 |
Contact name |
Jada Lewis |
E-mail(s) |
jada.lewis@fda.hhs.gov
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Organization name |
FDA
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Street address |
8301 Muirkirk Road
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City |
Laurel |
State/province |
MD |
ZIP/Postal code |
20708 |
Country |
USA |
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Platforms (1) |
GPL200 |
[Celegans] Affymetrix C. elegans Genome Array |
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Samples (15)
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GSM840594 |
N2 exposed to CVD109, biological rep1 |
GSM840595 |
N2 exposed to CVD109, biological rep2 |
GSM840596 |
N2 exposed to CVD109, biological rep3 |
GSM840597 |
N2 exposed to CVD110, biological rep1 |
GSM840598 |
N2 exposed to CVD110, biological rep2 |
GSM840599 |
N2 exposed to CVD110, biological rep3 |
GSM840600 |
N2 exposed to hemolysin mutant of E7946, biological rep1 |
GSM840601 |
N2 exposed to hemolysin mutant of E7946, biological rep2 |
GSM840602 |
N2 exposed to hemolysin mutant of E7946, biological rep3 |
GSM840603 |
N2 exposed to E7946, biological rep1 |
GSM840604 |
N2 exposed to E7946, biological rep2 |
GSM840605 |
N2 exposed to E7946, biological rep3 |
GSM840606 |
N2 exposed to OP50(E.coli), biological rep1 |
GSM840607 |
N2 exposed to OP50(E.coli), biological rep2 |
GSM840608 |
N2 exposed to OP50(E.coli), biological rep3 |
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Relations |
BioProject |
PRJNA148067 |
Supplementary file |
Size |
Download |
File type/resource |
GSE34026_RAW.tar |
32.9 Mb |
(http)(custom) |
TAR (of CEL, CHP) |
Processed data included within Sample table |
Processed data provided as supplementary file |
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